RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 USO1O60763 962 aaKnown RBP3.85□□□□□ -1.79
SMC6-208ENST00000481708 AOC2O75106 756 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 SNRPB2P08579 225 aaKnown RBP3.85□□□□□ -1.79
SMC6-208ENST00000481708 AKR1B1P15121 316 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 ECI1P42126 302 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 KPNA1P52294 538 aaPredicted RBP3.85□□□□□ -1.79
SMC6-208ENST00000481708 PPP2R5DQ14738 602 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
SMC6-208ENST00000481708 OTOP1Q7RTM1 612 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 LYSMD2Q8IV50 215 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 CAMKK1Q8N5S9 505 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 FAM13CQ8NE31 585 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 STT3BQ8TCJ2 826 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 WHAMMQ8TF30 809 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 IPO9Q96P70 1041 aaKnown RBP3.85□□□□□ -1.79
SMC6-208ENST00000481708 NFKBIL1Q9UBC1 381 aaPredicted RBP3.85□□□□□ -1.79
SMC6-208ENST00000481708 GPR34Q9UPC5 381 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 SCAF8Q9UPN6 1271 aaKnown RBP3.85□□□□□ -1.79
SMC6-208ENST00000481708 NUB1Q9Y5A7 615 aa3.85□□□□□ -1.79
SMC6-208ENST00000481708 CCDC66A2RUB6 948 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 A6NLC8 198 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 DLL1O00548 723 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 ULK1O75385 1050 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 GSNP06396 782 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 NEFMP07197 916 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 MYF5P13349 255 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 KRT20P35900 424 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 POU4F3Q15319 338 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 MPEG1Q2M385 716 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 NBPF12Q5TAG4 269 aaPredicted RBP3.84□□□□□ -1.79
SMC6-208ENST00000481708 NUGGCQ68CJ6 796 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 FAM47EQ6ZV65 393 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 ATG16L2Q8NAA4 619 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 PCYOX1LQ8NBM8 494 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 KCTD13Q8WZ19 329 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 HERVK_113Q902F9 699 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 GOLGA1Q92805 767 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 CGRRF1Q99675 332 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 PHF20Q9BVI0 1012 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 CDK19Q9BWU1 502 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 PLSCR4Q9NRQ2 329 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 BACE2Q9Y5Z0 518 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 COL15A1P39059 1388 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 P4HA2O15460 535 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 AMY2AP04746 511 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 CLEC2LP0C7M8 214 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 RAC2P15153 192 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 AMY2BP19961 511 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 ATP2B3Q16720 1220 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 PFKFB4Q16877 469 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 PGS1Q32NB8 556 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 LYPD4Q6UWN0 246 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 SESTD1Q86VW0 696 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 WFDC8Q8IUA0 241 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 DMRTC2Q8IXT2 367 aaPredicted RBP3.84□□□□□ -1.79
SMC6-208ENST00000481708 PHACTR4Q8IZ21 702 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 PPM1NQ8N819 430 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 WNT8BQ93098 351 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 CDHR1Q96JP9 859 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 SLX1AQ9BQ83 275 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.84□□□□□ -1.79
SMC6-208ENST00000481708 STK32BQ9NY57 414 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 WHRNQ9P202 907 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 CCDC39Q9UFE4 941 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 ADAM30Q9UKF2 790 aa3.84□□□□□ -1.79
SMC6-208ENST00000481708 CENPJQ9HC77 1338 aaPredicted RBP3.84□□□□□ -1.8
SMC6-208ENST00000481708 ARHGAP6O43182 974 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 CSTBP04080 98 aaKnown RBP3.84□□□□□ -1.8
SMC6-208ENST00000481708 PTMAP06454 111 aaKnown RBP3.84□□□□□ -1.8
SMC6-208ENST00000481708 PNLIPRP1P54315 467 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 ADKP55263 362 aaKnown RBP3.84□□□□□ -1.8
SMC6-208ENST00000481708 HTRA4P83105 476 aaPredicted RBP3.84□□□□□ -1.8
SMC6-208ENST00000481708 ANKRD39Q53RE8 183 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 SCARA3Q6AZY7 606 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 ZNF449Q6P9G9 518 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 RASGRP2Q7LDG7 609 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 MTDHQ86UE4 582 aaKnown RBP3.84□□□□□ -1.8
SMC6-208ENST00000481708 LRRTM4Q86VH4 590 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 ARL8AQ96BM9 186 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 CORO1BQ9BR76 489 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 PLEKHA5Q9HAU0 1116 aa3.84□□□□□ -1.8
SMC6-208ENST00000481708 A0A1W2PPH5 198 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 FSD2A1L4K1 749 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 AQP12BA6NM10 295 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 FAM177BA6PVY3 158 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 GOLGA8AA7E2F4 631 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 GOLGA8BA8MQT2 603 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 LGALS16A8MUM7 142 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 NPC1O15118 1278 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 HARSP12081 509 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 CTSKP43235 329 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 PHC1P78364 1004 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 SCRN1Q12765 414 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 AUHQ13825 339 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 SART3Q15020 963 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 SNX17Q15036 470 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ANO6Q4KMQ2 910 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ZNF362Q5T0B9 420 aaPredicted RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 ZBTB37Q5TC79 503 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 SP8Q8IXZ3 490 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms