RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 IL17DQ8TAD2 202 aa4.99□□□□□ -1.61
COPA-204ENST00000481522 GAB3Q8WWW8 586 aa4.99□□□□□ -1.61
COPA-204ENST00000481522 ACAP3Q96P50 834 aa4.99□□□□□ -1.61
COPA-204ENST00000481522 AGAP2Q99490 1192 aa4.99□□□□□ -1.61
COPA-204ENST00000481522 ANO3Q9BYT9 981 aa4.99□□□□□ -1.61
COPA-204ENST00000481522 NRP1O14786 923 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 JUNP05412 331 aaKnown RBP4.98□□□□□ -1.61
COPA-204ENST00000481522 CDK11BP21127 795 aaKnown RBP4.98□□□□□ -1.61
COPA-204ENST00000481522 TUBA3CQ13748 450 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 SAFB2Q14151 953 aaKnown RBP eCLIP4.98□□□□□ -1.61
COPA-204ENST00000481522 TUBA3EQ6PEY2 450 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 PCSK4Q6UW60 755 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 NECAB2Q7Z6G3 386 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 MRGPRGQ86SM5 289 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 UNC5BQ8IZJ1 945 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 D2HGDHQ8N465 521 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 OR14C36Q8NHC7 312 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 RSAD2Q8WXG1 361 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 LARP4BQ92615 738 aaKnown RBP4.98□□□□□ -1.61
COPA-204ENST00000481522 ARL8AQ96BM9 186 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 MMRN2Q9H8L6 949 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 IL23AQ9NPF7 189 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 TOPORSQ9NS56 1045 aaPredicted RBP4.98□□□□□ -1.61
COPA-204ENST00000481522 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.98□□□□□ -1.61
COPA-204ENST00000481522 NCDNQ9UBB6 729 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 NOP58Q9Y2X3 529 aaKnown RBP4.98□□□□□ -1.61
COPA-204ENST00000481522 DMRT1Q9Y5R6 373 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 NUMBLQ9Y6R0 609 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 TEX14Q8IWB6 1497 aa4.98□□□□□ -1.61
COPA-204ENST00000481522 ARID4BQ4LE39 1312 aaPredicted RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 SHANK3Q9BYB0 1731 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 PHLDB1Q86UU1 1377 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 hCG_2014768A0A024R1R8 64 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 A0A0A6YYK5 440 aaPredicted RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 CAPN14A8MX76 684 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 MAKP20794 623 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 KIR2DL3P43628 341 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 CDKN1CP49918 316 aaPredicted RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 MGAT5Q09328 741 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 FOXL1Q12952 345 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 SPIDRQ14159 915 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 ACAP1Q15027 740 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 MAMDC4Q6UXC1 1216 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 GAREM2Q75VX8 874 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 ADGRE4PQ86SQ3 457 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 PRPF38AQ8NAV1 312 aaKnown RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 ZNF483Q8TF39 744 aaPredicted RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 COG1Q8WTW3 980 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 AHCYL2Q96HN2 611 aaKnown RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 GPATCH3Q96I76 525 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 GPHA2Q96T91 129 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 TCF25Q9BQ70 676 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 SOX7Q9BT81 388 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 PUS7LQ9H0K6 701 aaKnown RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 KCTD10Q9H3F6 313 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 SLC5A4Q9NY91 659 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 TARBP1Q13395 1621 aaKnown RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 EPRSP07814 1512 aaKnown RBP4.97□□□□□ -1.61
COPA-204ENST00000481522 TOPBP1Q92547 1522 aa4.97□□□□□ -1.61
COPA-204ENST00000481522 TTC37Q6PGP7 1564 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 PLB1Q6P1J6 1458 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 UBE2QL1A1L167 161 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 ALG1L2C9J202 215 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 CYP27B1O15528 508 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 MTSS1O43312 755 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 ALDH1A2O94788 518 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 PRKD3O94806 890 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 SEC24DO94855 1032 aaPredicted RBP4.96□□□□□ -1.62
COPA-204ENST00000481522 LY86O95711 162 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 GAAP10253 952 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 ENPP1P22413 925 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 ACRV1P26436 265 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 GUCY2FP51841 1108 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 NPEPPSP55786 919 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 ANAPC15P60006 121 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 FSCN1Q16658 493 aaKnown RBP4.96□□□□□ -1.62
COPA-204ENST00000481522 UGT8Q16880 541 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.96□□□□□ -1.62
COPA-204ENST00000481522 PITRM1Q5JRX3 1037 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 FNDC7Q5VTL7 733 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 ZNF772Q68DY9 489 aaPredicted RBP4.96□□□□□ -1.62
COPA-204ENST00000481522 DEFB132Q7Z7B7 95 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 SGMS1Q86VZ5 419 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 MPHOSPH9Q99550 1183 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 AGO3Q9H9G7 860 aaKnown RBP4.96□□□□□ -1.62
COPA-204ENST00000481522 TLR9Q9NR96 1032 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 PRSS50Q9UI38 385 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 LRP6O75581 1613 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 SHROOM2Q13796 1616 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 PTPRKQ15262 1439 aa4.96□□□□□ -1.62
COPA-204ENST00000481522 PRAMEF4O60810 478 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 LPLP06858 475 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 LGALS4P56470 323 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 ADAM8P78325 824 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 CD69Q07108 199 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 CRHR2Q13324 411 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 PDCD1Q15116 288 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 CT83Q5H943 113 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 CMTM4Q8IZR5 234 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms