RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
CCM2-213ENST00000480658 TOPORSQ9NS56 1045 aaPredicted RBP12.63□□□□□ -0.39
CCM2-213ENST00000480658 DDX19AQ9NUU7 478 aaKnown RBP12.63□□□□□ -0.39
CCM2-213ENST00000480658 NT5C1B-RDH14C9J2C7 533 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 K7ERI5 159 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 NRP1O14786 923 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 DTNBO60941 627 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
CCM2-213ENST00000480658 NPTXRO95502 500 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 OR1G1P47890 313 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 GLUD2P49448 558 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 LLGL2Q6P1M3 1020 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 C15orf39Q6ZRI6 1047 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 MAEAQ7L5Y9 396 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 COLGALT2Q8IYK4 626 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 C4orf32Q8N8J7 132 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 MFSD14AQ96MC6 490 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 UROC1Q96N76 676 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 GAD1Q99259 594 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 PRRX2Q99811 253 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 EIF2AQ9BY44 585 aaKnown RBP12.62□□□□□ -0.39
CCM2-213ENST00000480658 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
CCM2-213ENST00000480658 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 DNAJB4Q9UDY4 337 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 USTQ9Y2C2 406 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 PCDHB6Q9Y5E3 794 aa12.62□□□□□ -0.39
CCM2-213ENST00000480658 MEIS3P2A8K0S8 358 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 THP07101 528 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 PDIA4P13667 645 aaKnown RBP12.61□□□□□ -0.39
CCM2-213ENST00000480658 GUCY2CP25092 1073 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 KLRC2P26717 231 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 SCNN1GP51170 649 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
CCM2-213ENST00000480658 STRN3Q13033 797 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 TUSC3Q13454 348 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 USP41Q3LFD5 358 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 HYIQ5T013 277 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 LARP1BQ659C4 914 aaKnown RBP12.61□□□□□ -0.39
CCM2-213ENST00000480658 ZNF280BQ86YH2 543 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 STAMQ92783 540 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 EDAQ92838 391 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 ACSF2Q96CM8 615 aaPredicted RBP12.61□□□□□ -0.39
CCM2-213ENST00000480658 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 MRPL4Q9BYD3 311 aaKnown RBP12.61□□□□□ -0.39
CCM2-213ENST00000480658 CCDC113Q9H0I3 377 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 S1PR5Q9H228 398 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 TMEM134Q9H6X4 195 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 CD320Q9NPF0 282 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 GPRC5CQ9NQ84 441 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 SLC38A7Q9NVC3 462 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 PARP2Q9UGN5 583 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 ADAM28Q9UKQ2 775 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 PCDHGC5Q9Y5F6 944 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 BRWD1Q9NSI6 2320 aa12.61□□□□□ -0.39
CCM2-213ENST00000480658 B4GALT5O43286 388 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 TRAPPC3O43617 180 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 TADA2AO75478 443 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 DDHD2O94830 711 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 GLUD1P00367 558 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 TOB1P50616 345 aaPredicted RBP12.6□□□□□ -0.39
CCM2-213ENST00000480658 DSG1Q02413 1049 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 RTL10Q7L3V2 364 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 TMEM173Q86WV6 379 aaPredicted RBP12.6□□□□□ -0.39
CCM2-213ENST00000480658 UBALD2Q8IYN6 164 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 TDRD5Q8NAT2 981 aaKnown RBP12.6□□□□□ -0.39
CCM2-213ENST00000480658 CMASQ8NFW8 434 aaPredicted RBP12.6□□□□□ -0.39
CCM2-213ENST00000480658 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 APOL6Q9BWW8 343 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 KMT5AQ9NQR1 393 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 FNIP2Q9P278 1114 aa12.6□□□□□ -0.39
CCM2-213ENST00000480658 LARSQ9P2J5 1176 aaKnown RBP12.6□□□□□ -0.39
CCM2-213ENST00000480658 PRG3Q9Y2Y8 225 aaPredicted RBP12.6□□□□□ -0.39
CCM2-213ENST00000480658 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 LONP1P36776 959 aaKnown RBP12.59□□□□□ -0.39
CCM2-213ENST00000480658 CLCN4P51793 760 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 MTMR3Q13615 1198 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 HSP90AA2PQ14568 343 aaPredicted RBP12.59□□□□□ -0.39
CCM2-213ENST00000480658 KYAT1Q16773 422 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 CCDC149Q6ZUS6 474 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 OTOP3Q7RTS5 596 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 ZBTB33Q86T24 672 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 RNF168Q8IYW5 571 aaPredicted RBP12.59□□□□□ -0.39
CCM2-213ENST00000480658 RASSF8Q8NHQ8 419 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 FAM122AQ96E09 287 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 RPGRIP1Q96KN7 1286 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 FBXL18Q96ME1 805 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 ZFP42Q96MM3 310 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 KLHL5Q96PQ7 755 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 CCDC94Q9BW85 323 aaPredicted RBP12.59□□□□□ -0.39
CCM2-213ENST00000480658 RXFP1Q9HBX9 757 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms