RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ACO2Q99798 780 aaKnown RBP13.44□□□□□ -0.26
TRA2B-212ENST00000480461 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
TRA2B-212ENST00000480461 PDZD7Q9H5P4 517 aa13.44□□□□□ -0.26
TRA2B-212ENST00000480461 CHST12Q9NRB3 414 aa13.44□□□□□ -0.26
TRA2B-212ENST00000480461 PRMT7Q9NVM4 692 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-212ENST00000480461 KCNG1Q9UIX4 513 aa13.44□□□□□ -0.26
TRA2B-212ENST00000480461 PTPRSQ13332 1948 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 MEIS3P2A8K0S8 358 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 K7ENM7 598 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 RHOBTB3O94955 611 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
TRA2B-212ENST00000480461 FAM26FQ5R3K3 315 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 ISM2Q6H9L7 571 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 SMG8Q8ND04 991 aaKnown RBP13.43□□□□□ -0.26
TRA2B-212ENST00000480461 PHOSPHO2Q8TCD6 241 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 ZNF507Q8TCN5 953 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 SCFD1Q8WVM8 642 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 TRAIPQ9BWF2 469 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 FTHL17Q9BXU8 183 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 CLSTN2Q9H4D0 955 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 PIN4Q9Y237 131 aaKnown RBP13.43□□□□□ -0.26
TRA2B-212ENST00000480461 GDAQ9Y2T3 454 aa13.43□□□□□ -0.26
TRA2B-212ENST00000480461 WDFY4Q6ZS81 3184 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 CNTNAP2Q9UHC6 1331 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 A0A0U1RQF3 1178 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 GOLGA6L22H0YM25 854 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 TGFB1I1O43294 461 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 BAIAP3O94812 1187 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 ERLIN2O94905 339 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 GCNT3O95395 438 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 ACTN1P12814 892 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 PROZP22891 400 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 NHLH1Q02575 133 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 KCNB1Q14721 858 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 PCBP1Q15365 356 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRA2B-212ENST00000480461 ATF7IP2Q5U623 682 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 SLC24A5Q71RS6 500 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 ZNF598Q86UK7 904 aaKnown RBP13.42□□□□□ -0.26
TRA2B-212ENST00000480461 ECHDC2Q86YB7 292 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 MAP4K3Q8IVH8 894 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 SMYD4Q8IYR2 804 aaPredicted RBP13.42□□□□□ -0.26
TRA2B-212ENST00000480461 GDPD5Q8WTR4 605 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 TOP1MTQ969P6 601 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 PRIMPOLQ96LW4 560 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 CXCL16Q9H2A7 254 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 MAN1B1Q9UKM7 699 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 TNFSF13BQ9Y275 285 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 HES2Q9Y543 173 aa13.42□□□□□ -0.26
TRA2B-212ENST00000480461 PHLPP2Q6ZVD8 1323 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 MEFVO15553 781 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-212ENST00000480461 ZNF623O75123 536 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 PIGRP01833 764 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 ZSCAN20P17040 1043 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-212ENST00000480461 ADSSP30520 456 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 AXLP30530 894 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 GATMP50440 423 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 AFF1P51825 1210 aaKnown RBP13.41□□□□□ -0.26
TRA2B-212ENST00000480461 PSMD2Q13200 908 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 L1TD1Q5T7N2 865 aaKnown RBP13.41□□□□□ -0.26
TRA2B-212ENST00000480461 MRPL10Q7Z7H8 261 aaKnown RBP13.41□□□□□ -0.26
TRA2B-212ENST00000480461 GJD3Q8N144 294 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 ZSWIM2Q8NEG5 633 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 GSDMAQ96QA5 445 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 MRPL4Q9BYD3 311 aaKnown RBP13.41□□□□□ -0.26
TRA2B-212ENST00000480461 UBE2ZQ9H832 354 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-212ENST00000480461 FAM105AQ9NUU6 356 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 EXOC1Q9NV70 894 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 KIAA1468Q9P260 1216 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 MAPK8IP1Q9UQF2 711 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 PCDHB2Q9Y5E7 798 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
TRA2B-212ENST00000480461 LCHNA4D1U4 455 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 H0YCG3 227 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 BIN1O00499 593 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 UPP2O95045 317 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 NPTXRO95502 500 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
TRA2B-212ENST00000480461 IBSPP21815 317 aaPredicted RBP13.4□□□□□ -0.26
TRA2B-212ENST00000480461 STRN3Q13033 797 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 BMT2Q1RMZ1 405 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 SEZ6Q53EL9 994 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 TWF2Q6IBS0 349 aaKnown RBP13.4□□□□□ -0.26
TRA2B-212ENST00000480461 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 NOTUMQ6P988 496 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 SLC27A1Q6PCB7 646 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 ZPBP2Q6X784 338 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 LPPQ93052 612 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 SMARCE1Q969G3 411 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 ACCSQ96QU6 501 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 CDT1Q9H211 546 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 LMCD1Q9NZU5 365 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 TMEM63CQ9P1W3 806 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 STYXL1Q9Y6J8 313 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 ZMYM2Q9UBW7 1377 aa13.4□□□□□ -0.26
TRA2B-212ENST00000480461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.39□□□□□ -0.27
TRA2B-212ENST00000480461 A0A0B4J269 797 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 FAM189A1O60320 539 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms