RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CCDC51Q96ER9 411 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SCLT1Q96NL6 688 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 LSM14BQ9BX40 385 aaKnown RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 MMRN2Q9H8L6 949 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 ANKFY1Q9P2R3 1169 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SIK3Q9Y2K2 1263 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 GOLGA8IPA6NC78 632 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 GOLGA8JA6NMD2 632 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 TRIM66O15016 1216 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 MAPK13O15264 365 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 FKTNO75072 461 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 GNRH1P01148 92 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 PIGRP01833 764 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 ADRB2P07550 413 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 TRIM49P0CI25 452 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 TRIM49CP0CI26 452 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 GJA9P57773 515 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 HSP90AA2PQ14568 343 aaPredicted RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SNRNP35Q16560 246 aaKnown RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 MAPK6Q16659 721 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 GPD1LQ8N335 351 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 CCDC155Q8N6L0 562 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 TMEM174Q8WUU8 243 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 KAT2BQ92831 832 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SLC35C1Q96A29 364 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 ZNF668Q96K58 619 aaPredicted RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 PPP1R16BQ96T49 567 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 CRACR2AQ9BSW2 395 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 MRPL4Q9BYD3 311 aaKnown RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 FAM207AQ9NSI2 230 aaPredicted RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SAGE1Q9NXZ1 904 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 LUC7L2Q9Y383 392 aaKnown RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 MICAL3Q7RTP6 2002 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 TTC26A0AVF1 554 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 MYADML2A6NDP7 307 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 KIAA0391O15091 583 aaKnown RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 KPNA6O60684 536 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 VTNP04004 478 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 HARSP12081 509 aaKnown RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 CCND3P30281 292 aaPredicted RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 ADSSP30520 456 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 KRT9P35527 623 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 MYL7Q01449 175 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 FIGNQ5HY92 759 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 SLFN12LQ6IEE8 588 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 NFRKBQ6P4R8 1299 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 LINC01465Q8N7H1 131 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 ZSWIM2Q8NEG5 633 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 ZNF397Q8NF99 534 aaPredicted RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 BAG1Q99933 345 aaPredicted RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 MSTO1Q9BUK6 570 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 TARS2Q9BW92 718 aaKnown RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 TTYH3Q9C0H2 523 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 CCDC113Q9H0I3 377 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 UPF3AQ9H1J1 476 aaKnown RBP11.36□□□□□ -0.59
LINC00173-203ENST00000480237 XPNPEP3Q9NQH7 507 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 ABHD10Q9NUJ1 306 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 SETD4Q9NVD3 440 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 GCNT4Q9P109 453 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 CAPN11Q9UMQ6 739 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 NRCAMQ92823 1304 aa11.36□□□□□ -0.59
LINC00173-203ENST00000480237 A0A1W2PQJ5 194 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 HAS3O00219 553 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 ZEB2O60315 1214 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 N4BP1O75113 896 aaKnown RBP11.35□□□□□ -0.59
LINC00173-203ENST00000480237 PGK1P00558 417 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 EDN1P05305 212 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 CYP2C9P11712 490 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 FMO5P49326 533 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 VAMP7P51809 220 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 PTPN5P54829 565 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 PTENP60484 403 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 PURAQ00577 322 aaKnown RBP11.35□□□□□ -0.59
LINC00173-203ENST00000480237 ZPBP2Q6X784 338 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 THSD4Q6ZMP0 1018 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 GBP6Q6ZN66 633 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 CACNA2D4Q7Z3S7 1137 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 USP37Q86T82 979 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 CBWD2Q8IUF1 395 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 MTG1Q9BT17 334 aaPredicted RBP11.35□□□□□ -0.59
LINC00173-203ENST00000480237 NAA15Q9BXJ9 866 aaKnown RBP11.35□□□□□ -0.59
LINC00173-203ENST00000480237 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
LINC00173-203ENST00000480237 AGO2Q9UKV8 859 aaKnown RBP11.35□□□□□ -0.59
LINC00173-203ENST00000480237 USP20Q9Y2K6 914 aa11.35□□□□□ -0.59
LINC00173-203ENST00000480237 A0A087WZ62 844 aa11.34□□□□□ -0.59
LINC00173-203ENST00000480237 GTPBP10A4D1E9 387 aaKnown RBP11.34□□□□□ -0.59
LINC00173-203ENST00000480237 ARHGAP6O43182 974 aa11.34□□□□□ -0.59
LINC00173-203ENST00000480237 EXTL3O43909 919 aa11.34□□□□□ -0.59
LINC00173-203ENST00000480237 STX10O60499 249 aa11.34□□□□□ -0.59
LINC00173-203ENST00000480237 MSCO60682 206 aa11.34□□□□□ -0.59
LINC00173-203ENST00000480237 ZBED6P86452 979 aa11.34□□□□□ -0.59
LINC00173-203ENST00000480237 MBTD1Q05BQ5 628 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms