RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 DHX33Q9H6R0 707 aaKnown RBP14.05□□□□□ -0.16
SEC13-216ENST00000479868 RNF181Q9P0P0 153 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 VPS18Q9P253 973 aa14.05□□□□□ -0.16
SEC13-216ENST00000479868 ZNFX1Q9P2E3 1918 aaKnown RBP14.05□□□□□ -0.16
SEC13-216ENST00000479868 IGKV6D-21A0A0A0MT36 114 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 A0A0G2JLL6 359 aaPredicted RBP14.04□□□□□ -0.16
SEC13-216ENST00000479868 GSTTP1A0A1W2PQM5 241 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 FTLP02792 175 aaPredicted RBP14.04□□□□□ -0.16
SEC13-216ENST00000479868 CHRNB2P17787 502 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 EDNRBP24530 442 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 TNFRSF8P28908 595 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 AARSP49588 968 aaKnown RBP eCLIP14.04□□□□□ -0.16
SEC13-216ENST00000479868 PRPF4BQ13523 1007 aaKnown RBP14.04□□□□□ -0.16
SEC13-216ENST00000479868 TAF3Q5VWG9 929 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 SND1Q7KZF4 910 aaKnown RBP eCLIP14.04□□□□□ -0.163e-11■■■□□ 16.6
SEC13-216ENST00000479868 PRRT2Q7Z6L0 340 aaPredicted RBP14.04□□□□□ -0.16
SEC13-216ENST00000479868 KLHL7Q8IXQ5 586 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 ISCUQ9H1K1 167 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 PORCNQ9H237 461 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 ACBD3Q9H3P7 528 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 RAB20Q9NX57 234 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 ADAM21Q9UKJ8 722 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 AMFRQ9UKV5 643 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 FAN1Q9Y2M0 1017 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 NOC2LQ9Y3T9 749 aaKnown RBP14.04□□□□□ -0.16
SEC13-216ENST00000479868 SYF2O95926 243 aaKnown RBP14.04□□□□□ -0.16
SEC13-216ENST00000479868 GLRA2P23416 452 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 MFAP3P55082 362 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 FAM193AP78312 1265 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 IRX3P78415 501 aaPredicted RBP14.04□□□□□ -0.16
SEC13-216ENST00000479868 GUCY2DQ02846 1103 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 EEPD1Q7L9B9 569 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 AP1M1Q9BXS5 423 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 EPB41L5Q9HCM4 733 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 GDF3Q9NR23 364 aa14.04□□□□□ -0.16
SEC13-216ENST00000479868 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 PGRMC1O00264 195 aaKnown RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 RAD51CO43502 376 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 CNMDO75829 334 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 IREB2P48200 963 aaKnown RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 CARSP49589 748 aaKnown RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 LIG4P49917 911 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 EPHB4P54760 987 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 WNT7BP56706 349 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 FAM71BQ8TC56 605 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 RIN2Q8WYP3 895 aaPredicted RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 DHX38Q92620 1227 aaKnown RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 TATDN2Q93075 761 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 NT5C1BQ96P26 610 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.161e-19■■□□□ 12.1
SEC13-216ENST00000479868 PI4K2AQ9BTU6 479 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 FHDC1Q9C0D6 1143 aaPredicted RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 ASCC2Q9H1I8 757 aaPredicted RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 MED4Q9NPJ6 270 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 CHORDC1Q9UHD1 332 aaPredicted RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 SIP14410 1827 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 ZNF233A6NK53 670 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 H0YCG3 227 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 AGPSO00116 658 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 MMEP08473 750 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 GTF2H1P32780 548 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 TNNC1P63316 161 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 TRADDQ15628 312 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 LMBRD2Q68DH5 695 aaPredicted RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 USP37Q86T82 979 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 IFT20Q8IY31 132 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 RASGEF1CQ8N431 466 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 ZNF516Q92618 1163 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 NIFKQ9BYG3 293 aaKnown RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 HAPLN2Q9GZV7 340 aa14.03□□□□□ -0.16
SEC13-216ENST00000479868 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.03□□□□□ -0.16
SEC13-216ENST00000479868 LRRIQ4A6NIV6 560 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 EXTL3O43909 919 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 CYP2C19P33261 490 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 ARL2P36404 184 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 GGCXP38435 758 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 NLRP11P59045 1033 aaKnown RBP14.02□□□□□ -0.16
SEC13-216ENST00000479868 FMO1Q01740 532 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 LY6KQ17RY6 165 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 DCAF12L1Q5VU92 463 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 SLC7A3Q8WY07 619 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 ZBTB45Q96K62 511 aaPredicted RBP14.02□□□□□ -0.16
SEC13-216ENST00000479868 TXNRD2Q9NNW7 524 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 PRDM4Q9UKN5 801 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 NFU1Q9UMS0 254 aa14.02□□□□□ -0.16
SEC13-216ENST00000479868 RTN2O75298 545 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 EDN1P05305 212 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 PGK2P07205 417 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 ITGA4P13612 1032 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 CYP11B1P15538 503 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 NAMPTP43490 491 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 ACOT2P49753 483 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 STRN3Q13033 797 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 EMBQ6PCB8 327 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 ERO1BQ86YB8 467 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms