RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 CCDC197Q8NCU1 140 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 NEK9Q8TD19 979 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 KRT35Q92764 455 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 RPS6KC1Q96S38 1066 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 DMAP1Q9NPF5 467 aaPredicted RBP11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 DLGAP2Q9P1A6 1054 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 CTTNBP2NLQ9P2B4 639 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 TMCO1Q9UM00 188 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 COG5Q9UP83 839 aa11.85□□□□□ -0.51
LRRFIP1-211ENST00000478958 FOXO6A8MYZ6 492 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 MEIS2O14770 477 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 TGFB1I1O43294 461 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 ATMINO43313 823 aaPredicted RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 SP100P23497 879 aaPredicted RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 RFC5P40937 340 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 KCNJ1P48048 391 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 POU5F1Q01860 360 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 ADCY1Q08828 1119 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 SPIRE1Q08AE8 756 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 KBTBD12Q3ZCT8 623 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 TBC1D10BQ4KMP7 808 aaPredicted RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 SLFN12Q8IYM2 578 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 METTL14Q9HCE5 456 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 INTS9Q9NV88 658 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 DNAJC17Q9NVM6 304 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 SLC12A4Q9UP95 1085 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 RABGAP1Q9Y3P9 1069 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 RPA1P27694 616 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 ALDH5A1P51649 535 aaPredicted RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 CCNG1P51959 295 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 PTENP60484 403 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 KLC1Q07866 573 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 ERMARDQ5T6L9 678 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 MEX3CQ5U5Q3 659 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 PPP1R18Q6NYC8 613 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 CEP128Q6ZU80 1094 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 APBB1IPQ7Z5R6 666 aaPredicted RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 CPNE8Q86YQ8 564 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 EIF1ADQ8N9N8 165 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 SLC20A1Q8WUM9 679 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 TRAPPC9Q96Q05 1148 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 ACP6Q9NPH0 428 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 TMEM98Q9Y2Y6 226 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 GMEB1Q9Y692 573 aa11.84□□□□□ -0.51
LRRFIP1-211ENST00000478958 DDX60LQ5H9U9 1706 aaKnown RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 EP400Q96L91 3159 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 NOVP48745 357 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 ATP11AP98196 1134 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 CBX3Q13185 183 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 MYBPC2Q14324 1141 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 MESDQ14696 234 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 SEPT14Q6ZU15 432 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 ZC3H3Q8IXZ2 948 aaKnown RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 ETNPPLQ8TBG4 499 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 IWS1Q96ST2 819 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 VCX3BQ9H321 246 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 EPB41L4BQ9H329 900 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 PABPC3Q9H361 631 aaKnown RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 ALG6Q9Y672 507 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 CNTNAP4Q9C0A0 1308 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 FOXN3O00409 490 aaPredicted RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 PSMC2P35998 433 aaKnown RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 FMO5P49326 533 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 KCNJ2P63252 427 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 TMED1Q13445 227 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 SLFN13Q68D06 897 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 DUPD1Q68J44 220 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 EPM2AIP1Q7L775 607 aaPredicted RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 SLC35B4Q969S0 331 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 BTBD6Q96KE9 485 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 EIF2AK1Q9BQI3 630 aaKnown RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 FAM129AQ9BZQ8 928 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 PCIF1Q9H4Z3 704 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 MYH7BA7E2Y1 1941 aa11.83□□□□□ -0.52
LRRFIP1-211ENST00000478958 IGKV6D-41A0A0C4DH26 115 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 TCRBV7S2A1N4TA0A589 114 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 TMEM221A6NGB7 291 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 MSH4O15457 936 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 TMCC1O94876 653 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 LMNB1P20700 586 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 RPL21P46778 160 aaKnown RBP11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 TRAPPC3LQ5T215 181 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 PRR5LQ6MZQ0 368 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 OLFML1Q6UWY5 402 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 CCDC105Q8IYK2 499 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 ELMO3Q96BJ8 720 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 TLCD1Q96CP7 247 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 POP1Q99575 1024 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms