RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 ITGB1P05556 798 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 MCF2P10911 925 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 PTMSP20962 102 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 NCKAP1LP55160 1127 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 GRIK3Q13003 919 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 MCM6Q14566 821 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 SKIV2LQ15477 1246 aaKnown RBP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 FAM173BQ6P4H8 233 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 FAM178BQ8IXR5 827 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 GPR65Q8IYL9 337 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 MICALL1Q8N3F8 863 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 MYCT1Q8N699 235 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 KLHL23Q8NBE8 558 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 TMEM161BQ8NDZ6 487 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 SPDYE1Q8NFV5 336 aaPredicted RBP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 HLA-CQ95604 372 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 CPB2Q96IY4 423 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 PLIN2Q99541 437 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 REEP2Q9BRK0 252 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 CCDC94Q9BW85 323 aaPredicted RBP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 TBC1D13Q9NVG8 400 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 RCOR1Q9UKL0 485 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 EXOC7Q9UPT5 735 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 SSX2IPQ9Y2D8 614 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 INPP5FQ9Y2H2 1132 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 TDRD15B5MCY1 1934 aaKnown RBP8.71□□□□□ -1.02
DDX39B-218ENST00000478365 CITO14578 2027 aa8.71□□□□□ -1.02
DDX39B-218ENST00000478365 CDH23Q9H251 3354 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 ARL5CA6NH57 179 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 K7ENM7 598 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SLC16A4O15374 487 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 B4GALT5O43286 388 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 TRAK2O60296 914 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 ZC3H11AO75152 810 aaKnown RBP eCLIP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 PIGRP01833 764 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 ALDH2P05091 517 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 MYL1P05976 194 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 LIG1P18858 919 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 GRM5P41594 1212 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 GATMP50440 423 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 BCAR1P56945 870 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 MRPS5P82675 430 aaKnown RBP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 GRIN1Q05586 938 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 NOLC1Q14978 699 aaKnown RBP eCLIP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 ZNF568Q3ZCX4 644 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SLFN12LQ6IEE8 588 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 CNNM4Q6P4Q7 775 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 ELMSAN1Q6PJG2 1045 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 MPZL3Q6UWV2 235 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 HAUS6Q7Z4H7 955 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 CCDC65Q8IXS2 484 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SLC39A11Q8N1S5 342 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SPRYD3Q8NCJ5 442 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SMG8Q8ND04 991 aaKnown RBP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SPPL3Q8TCT6 385 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 POF1BQ8WVV4 589 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 LPPQ93052 612 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 BICD1Q96G01 975 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SPATA32Q96LK8 384 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 CLIC6Q96NY7 704 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 ACO2Q99798 780 aaKnown RBP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 TCHPQ9BT92 498 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 EIF2AQ9BY44 585 aaKnown RBP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 OLFML3Q9NRN5 406 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 SLC38A7Q9NVC3 462 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 TFIP11Q9UBB9 837 aaKnown RBP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 PARP2Q9UGN5 583 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
DDX39B-218ENST00000478365 A0A0C4DFX4 3053 aa8.7□□□□□ -1.02
DDX39B-218ENST00000478365 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 RFXAPO00287 272 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 HNRNPDLO14979 420 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 GRM6O15303 877 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 CLDN3O15551 220 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 XPOTO43592 962 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 PROZP22891 400 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 PAX3P23760 479 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 MLH1P40692 756 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 LIG4P49917 911 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 POU5F1Q01860 360 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 CREMQ03060 361 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 DNM1Q05193 864 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 ELAVL2Q12926 359 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 DHX8Q14562 1220 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 SMC1AQ14683 1233 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 COL19A1Q14993 1142 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 POSTNQ15063 836 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 ARSHQ5FYA8 562 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 NT5DC1Q5TFE4 455 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 RESP18Q5W5W9 173 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 ADALQ6DHV7 355 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 PDXDC1Q6P996 788 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 LRRC55Q6ZSA7 311 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms