RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SPDYE1Q8NFV5 336 aaPredicted RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PHOSPHO2Q8TCD6 241 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PARD3BQ8TEW8 1205 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 CDKL2Q92772 493 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 GPKOWQ92917 476 aaPredicted RBP eCLIP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 ATP6V0A1Q93050 837 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 C8orf76Q96K31 380 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 UROC1Q96N76 676 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 NECAB3Q96P71 396 aaPredicted RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PIGSQ96S52 555 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 KATNAL1Q9BW62 490 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 RIOX1Q9H6W3 641 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 ATP6V0A4Q9HBG4 840 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 SEPT11Q9NVA2 429 aaKnown RBP6.42□□□□□ -1.38
TRA2B-211ENST00000477939 STK39Q9UEW8 545 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 PCDHA1Q9Y5I3 950 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 MTCH2Q9Y6C9 303 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 FRMPD4Q14CM0 1322 aa6.42□□□□□ -1.38
TRA2B-211ENST00000477939 LINC00854A0A1B0GVQ3 168 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TTC34A8MYJ7 566 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 IFIT3O14879 490 aaKnown RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TLL1O43897 1013 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 B3GALNT1O75752 331 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 RNASEH2AO75792 299 aaKnown RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 YEATS4O95619 227 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 GGPS1O95749 300 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 VIMP08670 466 aaKnown RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 MYCLP12524 364 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 POU3F3P20264 500 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 HOXC8P31273 242 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TSPAN7P41732 249 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 KCNJ6P48051 423 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TRAPPC10P48553 1259 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 KCNQ1P51787 676 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 ANTXR2P58335 489 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 NLRP5P59047 1200 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 PHEXP78562 749 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 ZNF200P98182 395 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 DR1Q01658 176 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 PPIDQ08752 370 aaKnown RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TROAPQ12815 778 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 MKRN4PQ13434 485 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 LAMC2Q13753 1193 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 COL9A3Q14050 684 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 C8orf34Q49A92 452 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 CELF3Q5SZQ8 465 aaKnown RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 ZNF618Q5T7W0 954 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 CREB3L3Q68CJ9 461 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 ADALQ6DHV7 355 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 CNKSR3Q6P9H4 555 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 NLRP9Q7RTR0 991 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 VSIG10LQ86VR7 867 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 SLC7A5P1Q8MH63 180 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 DCLK2Q8N568 766 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 C7orf31Q8N865 590 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 CEP112Q8N8E3 955 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 APPL2Q8NEU8 664 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 FAM200AQ8TCP9 573 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 HELQQ8TDG4 1101 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 GIPC2Q8TF65 315 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 SPIRE2Q8WWL2 714 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 ARNTL2Q8WYA1 636 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 SLC35B4Q969S0 331 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 SPATA33Q96N06 139 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 UHRF1Q96T88 793 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 GORASP1Q9BQQ3 440 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 C16orf70Q9BSU1 422 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 ALG1Q9BT22 464 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 BCAS3Q9H6U6 928 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 PARVGQ9HBI0 331 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TMEM165Q9HC07 324 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 CUEDC1Q9NWM3 386 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TFIP11Q9UBB9 837 aaKnown RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 LCMT1Q9UIC8 334 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 FBXO2Q9UK22 296 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 TMCO1Q9UM00 188 aa6.41□□□□□ -1.38
TRA2B-211ENST00000477939 G3BP2Q9UN86 482 aaKnown RBP6.41□□□□□ -1.38
TRA2B-211ENST00000477939 ATG2AQ2TAZ0 1938 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 COL4A6Q14031 1691 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 WDFY4Q6ZS81 3184 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 CCDC163A0A0D9SF12 145 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 PNMA6FA0A0J9YX94 578 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 HNRNPCL2B2RXH8 293 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 E7EWF7 191 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 GCOM1H8Y6P7 765 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 IFRD1O00458 451 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 NDUFAB1O14561 156 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 POLR3GO15318 223 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 BIRC5O15392 142 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 GTPBP6O43824 516 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 SNX2O60749 519 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 HNRNPCL1O60812 293 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 ZMYND10O75800 440 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 TMCC1O94876 653 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 GJB5O95377 273 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 LDHAP00338 332 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 S100A6P06703 90 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 POLR2MP0CAP2 368 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 CCDC166P0CW27 439 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms