RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ZSCAN5DPP0CG00 497 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 SPATA31C1P0DKV0 1188 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 LMNB1P20700 586 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 DNAJC3Q13217 504 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 CUL1Q13616 776 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 GLE1Q53GS7 698 aaKnown RBP10.46□□□□□ -0.73
CMC1-209ENST00000477739 COBLL1Q53SF7 1204 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 BSPRYQ5W0U4 402 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 INTS8Q75QN2 995 aaKnown RBP10.46□□□□□ -0.73
CMC1-209ENST00000477739 CAVIN3Q969G5 261 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 TMEM117Q9H0C3 514 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 KIF9Q9HAQ2 790 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 SAE1Q9UBE0 346 aaPredicted RBP10.46□□□□□ -0.73
CMC1-209ENST00000477739 PEX10O60683 326 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 CD19P15391 556 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 ASTE1Q2TB18 679 aaPredicted RBP10.46□□□□□ -0.73
CMC1-209ENST00000477739 NBPF20Q3BBV1 942 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 SLC5A5Q92911 643 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 ZKSCAN4Q969J2 545 aaPredicted RBP10.46□□□□□ -0.73
CMC1-209ENST00000477739 MKL1Q969V6 931 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 ERP44Q9BS26 406 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 IDI2Q9BXS1 227 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 EDEM3Q9BZQ6 932 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 METTL14Q9HCE5 456 aaKnown RBP10.46□□□□□ -0.73
CMC1-209ENST00000477739 AGPAT3Q9NRZ7 376 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 PCDHGC5Q9Y5F6 944 aa10.46□□□□□ -0.73
CMC1-209ENST00000477739 CEP350Q5VT06 3117 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 E2F8A0AVK6 867 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 O00370 1275 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 ECEL1O95672 775 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 PAX7P23759 505 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 HOXD13P35453 343 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 SREBF1P36956 1147 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 JAG1P78504 1218 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 PPP3CAQ08209 521 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 EPHA7Q15375 998 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 SMTNL2Q2TAL5 461 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 ZBTB33Q86T24 672 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 FNBP1Q96RU3 617 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 AGPAT1Q99943 283 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 NCAPGQ9BPX3 1015 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 FAM114A2Q9NRY5 505 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 CHST7Q9NS84 486 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 MRPL11Q9Y3B7 192 aaKnown RBP10.46□□□□□ -0.74
CMC1-209ENST00000477739 RREB1Q92766 1687 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 NAV1Q8NEY1 1877 aa10.46□□□□□ -0.74
CMC1-209ENST00000477739 PITPNM2Q9BZ72 1349 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 CHUKO15111 745 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 TGFB1I1O43294 461 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 GCKP35557 465 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 PCK1P35558 622 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 EDRF1Q3B7T1 1238 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ECT2Q9H8V3 914 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
CMC1-209ENST00000477739 WRAP73Q9P2S5 460 aaPredicted RBP10.45□□□□□ -0.74
CMC1-209ENST00000477739 APEX2Q9UBZ4 518 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 IGF2BP3O00425 579 aaKnown RBP eCLIP10.45□□□□□ -0.74
CMC1-209ENST00000477739 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
CMC1-209ENST00000477739 KRT19P08727 400 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 HNRNPH3P31942 346 aaKnown RBP10.45□□□□□ -0.74
CMC1-209ENST00000477739 PDE6CP51160 858 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 VAMP7P51809 220 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 CCDC6Q16204 474 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ZCWPW2Q504Y3 356 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 DCAF12L1Q5VU92 463 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 SIAH1Q8IUQ4 282 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ETNPPLQ8TBG4 499 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 TATDN2Q93075 761 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 YIPF3Q9GZM5 350 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 TMEM39BQ9GZU3 492 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 SYNCQ9H7C4 482 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ETNK1Q9HBU6 452 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 LARSQ9P2J5 1176 aaKnown RBP10.45□□□□□ -0.74
CMC1-209ENST00000477739 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 LAMB1P07942 1786 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 LRRIQ4A6NIV6 560 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 TBX3O15119 743 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 EYA4O95677 639 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ETS1P14921 441 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ATF2P15336 505 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 CHKAP35790 457 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 CPA2P48052 419 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 DTX3LQ8TDB6 740 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 GMCL1Q96IK5 515 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ZWILCHQ9H900 591 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 ANAPC5Q9UJX4 755 aa10.45□□□□□ -0.74
CMC1-209ENST00000477739 RASA4BC9J798 803 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 PDXKO00764 312 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 RASA4O43374 803 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TARSP26639 723 aaKnown RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 MARK3P27448 753 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 HOXA7P31268 230 aaPredicted RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 NOP14P78316 857 aaKnown RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 MTERF2Q49AM1 385 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 DCUN1D2Q6PH85 259 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 FRMD5Q7Z6J6 570 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 CTAGE3PQ8IX95 158 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 FBF1Q8TES7 1133 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TGS1Q96RS0 853 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms