RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 LCTP09848 1927 aa8.6□□□□□ -1.03
VMA21-203ENST00000477649 PCNTO95613 3336 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 A0A0B4J269 797 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 CTAGE15A4D2H0 777 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 LRRIQ4A6NIV6 560 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ANKRD63C9JTQ0 380 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 CES2O00748 559 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ZNF263O14978 683 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TADA3O75528 432 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TOM1L1O75674 476 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ARIH2O95376 493 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 H2AFZP0C0S5 128 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 CTAGE8P0CG41 777 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TRIM49P0CI25 452 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TRIM49CP0CI26 452 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ACTN1P12814 892 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 HOXD8P13378 290 aaPredicted RBP8.59□□□□□ -1.03
VMA21-203ENST00000477649 BPIFB4P59827 614 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 AMPD2Q01433 879 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 CYP27A1Q02318 531 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 GCNT1Q02742 428 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 PTK2Q05397 1052 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ARHGAP1Q07960 439 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 PPP3CAQ08209 521 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 NCBP1Q09161 790 aaKnown RBP8.59□□□□□ -1.03
VMA21-203ENST00000477649 PLCB4Q15147 1175 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 PCBP1Q15365 356 aaKnown RBP eCLIP8.59□□□□□ -1.03
VMA21-203ENST00000477649 KIAA0753Q2KHM9 967 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 HSDL1Q3SXM5 330 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 DUSP28Q4G0W2 176 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TAPT1Q6NXT6 567 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ALKBH5Q6P6C2 394 aaKnown RBP8.59□□□□□ -1.03
VMA21-203ENST00000477649 H2AFVQ71UI9 128 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TRAPPC11Q7Z392 1133 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 APBB1IPQ7Z5R6 666 aaPredicted RBP8.59□□□□□ -1.03
VMA21-203ENST00000477649 GPR142Q7Z601 462 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 CTAGE6Q86UF2 777 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 IFNLR1Q8IU57 520 aaPredicted RBP8.59□□□□□ -1.03
VMA21-203ENST00000477649 FBXO16Q8IX29 292 aaPredicted RBP8.59□□□□□ -1.03
VMA21-203ENST00000477649 CTAGE4Q8IX94 777 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 SYCE1Q8N0S2 351 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 RDH13Q8NBN7 331 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ZNF526Q8TF50 670 aaPredicted RBP8.59□□□□□ -1.03
VMA21-203ENST00000477649 RUBCNQ92622 972 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TMEM143Q96AN5 459 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 FAXDC2Q96IV6 333 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 NT5C1BQ96P26 610 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 CARD6Q9BX69 1037 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 TMEM117Q9H0C3 514 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 RAB20Q9NX57 234 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 ADAMTS1Q9UHI8 967 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 NAGPAQ9UK23 515 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 LRRC37A2A6NM11 1700 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 MYH11P35749 1972 aa8.59□□□□□ -1.03
VMA21-203ENST00000477649 KIAA1217Q5T5P2 1943 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 ADGRA3Q8IWK6 1321 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 A0A087X0T9 212 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 A0A0U1RQG5 324 aaPredicted RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 RRN3P2A6NIE6 340 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 CLDN3O15551 220 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 EVI5O60447 810 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 PLEKP08567 350 aaPredicted RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 FAM228BP0C875 321 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 GZMAP12544 262 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 GCLMP48507 274 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 HUNKP57058 714 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 GFPT1Q06210 699 aaPredicted RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 CAPSQ13938 189 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 TCEAL1Q15170 157 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 CLUL1Q15846 466 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 FAM187BQ17R55 369 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 WDR44Q5JSH3 913 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 C1orf220Q5T0J3 134 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 CCDC70Q6NSX1 233 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 SLC39A4Q6P5W5 647 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 C15orf39Q6ZRI6 1047 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 RSRC2Q7L4I2 434 aaKnown RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 EEPD1Q7L9B9 569 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 TAS1R3Q7RTX0 852 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 TRMT1LQ7Z2T5 733 aaKnown RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 ZNF571Q7Z3V5 609 aaPredicted RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 ZNF677Q86XU0 584 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 CBWD2Q8IUF1 395 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 FAM71AQ8IYT1 594 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 ASAP3Q8TDY4 903 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 PRPF31Q8WWY3 499 aaKnown RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 SOCS4Q8WXH5 440 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 CCDC102AQ96A19 550 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 MAML3Q96JK9 1138 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 SH2D3AQ9BRG2 576 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 TINF2Q9BSI4 451 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 KIFC3Q9BVG8 833 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 PRMT7Q9NVM4 692 aaPredicted RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 SUCLA2Q9P2R7 463 aaPredicted RBP8.58□□□□□ -1.04
VMA21-203ENST00000477649 NENFQ9UMX5 172 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 Q9Y3F1 56 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 HYOU1Q9Y4L1 999 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 PCDHGC5Q9Y5F6 944 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms