RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 SPDYE2BA6NHP3 402 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 ICAM1P05362 532 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 SPDYE6P0CI01 402 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 DRD4P21917 467 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 ENPEPQ07075 957 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 RASA3Q14644 834 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 AOC3Q16853 763 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 ADAT2Q7Z6V5 191 aaKnown RBP19.44■□□□□ 0.7
CCM2-209ENST00000477605 CPLX4Q7Z7G2 160 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 SHC3Q92529 594 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 KRT35Q92764 455 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 RNF25Q96BH1 459 aaPredicted RBP19.44■□□□□ 0.7
CCM2-209ENST00000477605 C18orf8Q96DM3 657 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 CBWD1Q9BRT8 395 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 PLVAPQ9BX97 442 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 TMEM117Q9H0C3 514 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 TBC1D22BQ9NU19 505 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 COQ4Q9Y3A0 265 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 UBIAD1Q9Y5Z9 338 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 SLX4Q8IY92 1834 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 BRCA1P38398 1863 aaKnown RBP19.44■□□□□ 0.7
CCM2-209ENST00000477605 DCDC2CA8MYV0 355 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 SGPL1O95470 568 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 RARGP13631 454 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 NCKAP1LP55160 1127 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 MESDQ14696 234 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 FKBP1CQ5VVH2 108 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 KCNV1Q6PIU1 500 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 CCDC137Q6PK04 289 aaKnown RBP19.44■□□□□ 0.7
CCM2-209ENST00000477605 SLC13A5Q86YT5 568 aaPredicted RBP19.44■□□□□ 0.7
CCM2-209ENST00000477605 SLCO2A1Q92959 643 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 PCDHB18PQ96TA0 734 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 AGO4Q9HCK5 861 aaKnown RBP19.44■□□□□ 0.7
CCM2-209ENST00000477605 TRPC6Q9Y210 931 aa19.44■□□□□ 0.7
CCM2-209ENST00000477605 SCN9AQ15858 1988 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 RGS16O15492 202 aaPredicted RBP19.43■□□□□ 0.7
CCM2-209ENST00000477605 GHRP10912 638 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 CHRNA5P30532 468 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 COILP38432 576 aaPredicted RBP19.43■□□□□ 0.7
CCM2-209ENST00000477605 PCNX4Q63HM2 1172 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 NOP9Q86U38 636 aaKnown RBP19.43■□□□□ 0.7
CCM2-209ENST00000477605 C4orf19Q8IY42 314 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 CCDC13Q8IYE1 715 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 ART4Q93070 314 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 PASKQ96RG2 1323 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 ROPN1BQ9BZX4 212 aaPredicted RBP19.43■□□□□ 0.7
CCM2-209ENST00000477605 KDM4CQ9H3R0 1056 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 CCDC134Q9H6E4 229 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 ROPN1Q9HAT0 212 aaPredicted RBP19.43■□□□□ 0.7
CCM2-209ENST00000477605 BCS1LQ9Y276 419 aa19.43■□□□□ 0.7
CCM2-209ENST00000477605 TCP10L2B9ZVM9 353 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 GTF2H1P32780 548 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 COPB2P35606 906 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 RPL21P46778 160 aaKnown RBP19.42■□□□□ 0.7
CCM2-209ENST00000477605 RWDD2BP57060 319 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 QPCTQ16769 361 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 LRRC19Q9H756 370 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 A1CFQ9NQ94 594 aaKnown RBP19.42■□□□□ 0.7
CCM2-209ENST00000477605 ZNF70Q9UC06 446 aaPredicted RBP19.42■□□□□ 0.7
CCM2-209ENST00000477605 PNMA2Q9UL42 364 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 ASAP2O43150 1006 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 SHBGP04278 402 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 GPC3P51654 580 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 SLC29A2Q14542 456 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 TKFCQ3LXA3 575 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 KRT39Q6A163 491 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 TTC27Q6P3X3 843 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 USP37Q86T82 979 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 ZNF564Q8TBZ8 553 aaPredicted RBP19.42■□□□□ 0.7
CCM2-209ENST00000477605 TMC2Q8TDI7 906 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 MAIP1Q8WWC4 291 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 KIFAP3Q92845 792 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 ANKEF1Q9NU02 776 aa19.42■□□□□ 0.7
CCM2-209ENST00000477605 TMEM110-MUSTN1A8MSY1 372 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 RASSF9O75901 435 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 PYGMP11217 842 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 CAP2P40123 477 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 CDR2Q01850 454 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 TNFAIP8L3Q5GJ75 292 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 TRMT10CQ7L0Y3 403 aaKnown RBP19.41■□□□□ 0.7
CCM2-209ENST00000477605 PLEKHO2Q8TD55 490 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 FAM81BQ96LP2 452 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 KREMEN1Q96MU8 473 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 NUP85Q9BW27 656 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 TMEM8AQ9HCN3 771 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 PIM2Q9P1W9 311 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 CCPG1Q9ULG6 757 aa19.41■□□□□ 0.7
CCM2-209ENST00000477605 DDX39AO00148 427 aaKnown RBP19.4■□□□□ 0.7
CCM2-209ENST00000477605 SPOPO43791 374 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 CTNND1O60716 968 aaKnown RBP19.4■□□□□ 0.7
CCM2-209ENST00000477605 YWHABP31946 246 aaKnown RBP19.4■□□□□ 0.7
CCM2-209ENST00000477605 MARCKSL1P49006 195 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 FMO1Q01740 532 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 GRIPAP1Q4V328 841 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 ANKRD20A8PQ5CZ79 823 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 MFSD5Q6N075 450 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 SYDE1Q6ZW31 735 aaPredicted RBP19.4■□□□□ 0.7
CCM2-209ENST00000477605 CCDC105Q8IYK2 499 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 ZNF784Q8NCA9 323 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms