RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 IFT74Q96LB3 600 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 KRT12Q99456 494 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.42□□□□□ -0.422e-7■■■■■ 27.6
NUP188-205ENST00000477069 ACBD3Q9H3P7 528 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 TTC7AQ9ULT0 858 aaPredicted RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 ABCB4P21439 1286 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 SCP2P22307 547 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 GLRA2P23416 452 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 PTPROQ16827 1216 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 DCAF12L1Q5VU92 463 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 EMBQ6PCB8 327 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 SEPT14Q6ZU15 432 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 SV2AQ7L0J3 742 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 FBXL13Q8NEE6 735 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 AFAP1L1Q8TED9 768 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 GDAP1L1Q96MZ0 367 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 HAPLN2Q9GZV7 340 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 RAB20Q9NX57 234 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 NOC2LQ9Y3T9 749 aaKnown RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 CSADQ9Y600 493 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 ZSCAN5CA6NGD5 496 aaPredicted RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 PGRMC1O00264 195 aaKnown RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 MFAP3P55082 362 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 ZNF516Q92618 1163 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 FGD4Q96M96 766 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 RAD51CO43502 376 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 EXTL3O43909 919 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 MTA2O94776 668 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 HEXIM1O94992 359 aaKnown RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 GZMAP12544 262 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 NAMPTP43490 491 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 POLGP54098 1239 aaPredicted RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 GYS2P54840 703 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 RNASE9P60153 205 aaKnown RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 TNNC1P63316 161 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 FMO1Q01740 532 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 NNTQ13423 1086 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 MOGSQ13724 837 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 SLC47A2Q86VL8 602 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 RHOT2Q8IXI1 618 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 PPM1KQ8N3J5 372 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 DDX1Q92499 740 aaKnown RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 TMEM143Q96AN5 459 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
NUP188-205ENST00000477069 AMFRQ9UKV5 643 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 FAN1Q9Y2M0 1017 aa12.41□□□□□ -0.42
NUP188-205ENST00000477069 CYP26A1O43174 497 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 CEP104O60308 925 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 RTN2O75298 545 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
NUP188-205ENST00000477069 EDN1P05305 212 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 WNT7BP56706 349 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
NUP188-205ENST00000477069 IFT20Q8IY31 132 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 PSPC1Q8WXF1 523 aaKnown RBP12.4□□□□□ -0.42
NUP188-205ENST00000477069 FAM213AQ9BRX8 229 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 ELP3Q9H9T3 547 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 PSD3Q9NYI0 1048 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 ADAM21Q9UKJ8 722 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 ZC3H11AO75152 810 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUP188-205ENST00000477069 CARSP49589 748 aaKnown RBP12.4□□□□□ -0.42
NUP188-205ENST00000477069 PSMD6Q15008 389 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 C11orf63Q6NUN7 778 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUP188-205ENST00000477069 USP37Q86T82 979 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 CASKIN2Q8WXE0 1202 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 EXOC4Q96A65 974 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 NT5C1BQ96P26 610 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 ACP6Q9NPH0 428 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 SEPT11Q9NVA2 429 aaKnown RBP12.4□□□□□ -0.42
NUP188-205ENST00000477069 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.42
NUP188-205ENST00000477069 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 CLSTN1O94985 981 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 CYP11B1P15538 503 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 IREB2P48200 963 aaKnown RBP12.39□□□□□ -0.43
NUP188-205ENST00000477069 GCNT1Q02742 428 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 GADL1Q6ZQY3 521 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 ZNF771Q7L3S4 317 aaPredicted RBP12.39□□□□□ -0.43
NUP188-205ENST00000477069 CCDC102AQ96A19 550 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
NUP188-205ENST00000477069 KIAA1586Q9HCI6 787 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.39□□□□□ -0.433e-13■■■■■ 57.7
NUP188-205ENST00000477069 VPS18Q9P253 973 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 DIS3Q9Y2L1 958 aaKnown RBP12.39□□□□□ -0.43
NUP188-205ENST00000477069 ADGRA2Q96PE1 1338 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 ZSWIM8A7E2V4 1837 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 CXCL11O14625 94 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 KIAA0391O15091 583 aaKnown RBP12.39□□□□□ -0.43
NUP188-205ENST00000477069 GRIN3BO60391 1043 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 MMEP08473 750 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 ECHS1P30084 290 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 GGCXP38435 758 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 RFC5P40937 340 aa12.39□□□□□ -0.43
NUP188-205ENST00000477069 NLRP11P59045 1033 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms