RNA–Protein interactions for RNA: ENST00000477057.5

FDPS-211, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-211ENST00000477057 CUEDC2Q9H467 287 aa13.89□□□□□ -0.19
FDPS-211ENST00000477057 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
FDPS-211ENST00000477057 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
FDPS-211ENST00000477057 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
FDPS-211ENST00000477057 LAMA3Q16787 3333 aa13.89□□□□□ -0.19
FDPS-211ENST00000477057 GRM6O15303 877 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 FGF18O76093 207 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 RECQL4O94761 1208 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 GAP43P17677 238 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 YARSP54577 528 aaKnown RBP13.88□□□□□ -0.19
FDPS-211ENST00000477057 BCAR1P56945 870 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 KCNT2Q6UVM3 1135 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 LRRC55Q6ZSA7 311 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 TAS1R3Q7RTX0 852 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 MRPL10Q7Z7H8 261 aaKnown RBP13.88□□□□□ -0.19
FDPS-211ENST00000477057 NOC3LQ8WTT2 800 aaKnown RBP13.88□□□□□ -0.19
FDPS-211ENST00000477057 ACO2Q99798 780 aaKnown RBP13.88□□□□□ -0.19
FDPS-211ENST00000477057 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
FDPS-211ENST00000477057 BLZF1Q9H2G9 400 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 CWH43Q9H720 699 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 ENTPD7Q9NQZ7 604 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 SERTAD1Q9UHV2 236 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 TNFSF13BQ9Y275 285 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 MTCH2Q9Y6C9 303 aa13.88□□□□□ -0.19
FDPS-211ENST00000477057 ARL5CA6NH57 179 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 LPXNO60711 386 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 NR1I2O75469 434 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 ITGB1P05556 798 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 PPM1AP35813 382 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 SYKP43405 635 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 OR1G1P47890 313 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 ZNF131P52739 623 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 KRT17Q04695 432 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.195e-6■□□□□ 8.1
FDPS-211ENST00000477057 E2F4Q16254 413 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 TIGD5Q53EQ6 642 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
FDPS-211ENST00000477057 ADALQ6DHV7 355 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 MPZL3Q6UWV2 235 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 SLC17A8Q8NDX2 589 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 POF1BQ8WVV4 589 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
FDPS-211ENST00000477057 MRPL38Q96DV4 380 aaKnown RBP13.87□□□□□ -0.19
FDPS-211ENST00000477057 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 CDT1Q9H211 546 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 MAGEF1Q9HAY2 307 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 SPG21Q9NZD8 308 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 KANSL3Q9P2N6 904 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
FDPS-211ENST00000477057 TBX20Q9UMR3 447 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 PLAGL2Q9UPG8 496 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 GIT1Q9Y2X7 761 aa13.87□□□□□ -0.19
FDPS-211ENST00000477057 PRG3Q9Y2Y8 225 aaPredicted RBP13.87□□□□□ -0.19
FDPS-211ENST00000477057 C5orf67F2Z3F1 127 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 CLDN3O15551 220 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 LINC00271P0C7V0 271 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 CASP1P29466 404 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 AFF1P51825 1210 aaKnown RBP13.86□□□□□ -0.19
FDPS-211ENST00000477057 COASYQ13057 564 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 SEZ6Q53EL9 994 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 GLRA4Q5JXX5 417 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 PLPP4Q5VZY2 271 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 ZNF280BQ86YH2 543 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 CEP120Q8N960 986 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 RSPH1Q8WYR4 309 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 P2RX5Q93086 422 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 ZBTB45Q96K62 511 aaPredicted RBP13.86□□□□□ -0.19
FDPS-211ENST00000477057 NTPCRQ9BSD7 190 aaKnown RBP13.86□□□□□ -0.19
FDPS-211ENST00000477057 IGFLR1Q9H665 355 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 NRDE2Q9H7Z3 1164 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 TOPORSQ9NS56 1045 aaPredicted RBP13.86□□□□□ -0.19
FDPS-211ENST00000477057 SEL1LQ9UBV2 794 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 DNAJB4Q9UDY4 337 aa13.86□□□□□ -0.19
FDPS-211ENST00000477057 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
FDPS-211ENST00000477057 TOM1L1O75674 476 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 DDHD2O94830 711 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 MYBP10242 640 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 MCF2P10911 925 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 CMA1P23946 247 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 ABCD1P33897 745 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 SLC11A1P49279 550 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 NDUFA8P51970 172 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 GRIK3Q13003 919 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 STXBP4Q6ZWJ1 553 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 TMEM87AQ8NBN3 555 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 PPP2R3CQ969Q6 453 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 DNAJC19Q96DA6 116 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 LMAN2LQ9H0V9 348 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
FDPS-211ENST00000477057 TLR9Q9NR96 1032 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 CHMP5Q9NZZ3 219 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 EXOC7Q9UPT5 735 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
FDPS-211ENST00000477057 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
FDPS-211ENST00000477057 GRM5P41594 1212 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms