RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 CNNM4Q6P4Q7 775 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 TOGARAM2Q6ZUX3 1019 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 ZNF354CQ86Y25 554 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 LRRC47Q8N1G4 583 aaKnown RBP6.99□□□□□ -1.29
NUP58-209ENST00000476553 PCDH19Q8TAB3 1148 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 TIFAQ96CG3 184 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 GPHA2Q96T91 129 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 SYNPO2LQ9H987 977 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 SMURF1Q9HCE7 757 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 FBXO2Q9UK22 296 aaPredicted RBP6.99□□□□□ -1.29
NUP58-209ENST00000476553 FZD1Q9UP38 647 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 RPGRIP1LQ68CZ1 1315 aa6.99□□□□□ -1.29
NUP58-209ENST00000476553 ITGB1P05556 798 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 PYGMP11217 842 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 KRT15P19012 456 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 GEMIN4P57678 1058 aaKnown RBP6.98□□□□□ -1.29
NUP58-209ENST00000476553 STRN3Q13033 797 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 TCIRG1Q13488 830 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 CCDC184Q52MB2 194 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 LY6G5CQ5SRR4 150 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 LHFPL2Q6ZUX7 228 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 SYNE4Q8N205 404 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 PPM1KQ8N3J5 372 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 NGDNQ8NEJ9 315 aaKnown RBP6.98□□□□□ -1.29
NUP58-209ENST00000476553 PPHLN1Q8NEY8 458 aaKnown RBP6.98□□□□□ -1.29
NUP58-209ENST00000476553 ATXN2LQ8WWM7 1075 aaKnown RBP6.98□□□□□ -1.29
NUP58-209ENST00000476553 ASB15Q8WXK1 588 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 SLC7A6OSQ96CW6 309 aaPredicted RBP6.98□□□□□ -1.29
NUP58-209ENST00000476553 SCLT1Q96NL6 688 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 TOR3AQ9H497 397 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 PLCB1Q9NQ66 1216 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 CATSPERZQ9NTU4 200 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 POLG2Q9UHN1 485 aa6.98□□□□□ -1.29
NUP58-209ENST00000476553 TRAV20A0A0B4J274 112 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 ARVCFO00192 962 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 AQP7O14520 342 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 GABRDO14764 452 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 PIP5K1CO60331 668 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 BRINP1O60477 761 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 PTMAP06454 111 aaKnown RBP6.97□□□□□ -1.29
NUP58-209ENST00000476553 TYRP1P17643 537 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 ZNF280AP59817 542 aaPredicted RBP6.97□□□□□ -1.29
NUP58-209ENST00000476553 KRT72Q14CN4 511 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 MINDY4Q4G0A6 757 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 CCDC93Q567U6 631 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 HYIQ5T013 277 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 KLHDC10Q6PID8 442 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 FAM111BQ6SJ93 734 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 GAREM2Q75VX8 874 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 C16orf59Q7L2K0 433 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 SPATS2Q86XZ4 545 aaKnown RBP6.97□□□□□ -1.29
NUP58-209ENST00000476553 GSPT2Q8IYD1 628 aaKnown RBP6.97□□□□□ -1.29
NUP58-209ENST00000476553 AHI1Q8N157 1196 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 VPS37AQ8NEZ2 397 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 PROKR1Q8TCW9 393 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 LEO1Q8WVC0 666 aaPredicted RBP6.97□□□□□ -1.29
NUP58-209ENST00000476553 MPP4Q96JB8 637 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 GPR101Q96P66 508 aaPredicted RBP6.97□□□□□ -1.29
NUP58-209ENST00000476553 C9orf78Q9NZ63 289 aaPredicted RBP6.97□□□□□ -1.29
NUP58-209ENST00000476553 TRHDEQ9UKU6 1024 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 ASAP1Q9ULH1 1129 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 IPPQ9Y573 584 aa6.97□□□□□ -1.29
NUP58-209ENST00000476553 ABHD16AO95870 558 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 ITGB6P18564 788 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 CD38P28907 300 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 MAP3K12Q12852 859 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 STAT4Q14765 748 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 ACAP1Q15027 740 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 PTPAQ15257 358 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 SAFBQ15424 915 aaKnown RBP eCLIP6.96□□□□□ -1.3
NUP58-209ENST00000476553 SYDE2Q5VT97 1194 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 MMS22LQ6ZRQ5 1243 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 MAMDC2Q7Z304 686 aaPredicted RBP6.96□□□□□ -1.3
NUP58-209ENST00000476553 MTDHQ86UE4 582 aaKnown RBP6.96□□□□□ -1.3
NUP58-209ENST00000476553 GJA10Q969M2 543 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 SKA1Q96BD8 255 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 ERP27Q96DN0 273 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 IFT122Q9HBG6 1241 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 NOL7Q9UMY1 257 aaKnown RBP6.96□□□□□ -1.3
NUP58-209ENST00000476553 RABGAP1Q9Y3P9 1069 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 TNKSO95271 1327 aa6.96□□□□□ -1.3
NUP58-209ENST00000476553 KCNK3O14649 394 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 SDSP20132 328 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 SESN2P58004 480 aaPredicted RBP6.95□□□□□ -1.3
NUP58-209ENST00000476553 CHAF1AQ13111 956 aaPredicted RBP6.95□□□□□ -1.3
NUP58-209ENST00000476553 DHCR24Q15392 516 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 PUM3Q15397 648 aaKnown RBP6.95□□□□□ -1.3
NUP58-209ENST00000476553 COBLL1Q53SF7 1204 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 HECTD2Q5U5R9 776 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 PAPD7Q5XG87 772 aaKnown RBP6.95□□□□□ -1.3
NUP58-209ENST00000476553 EP400NLQ6ZTU2 488 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 NOSTRINQ8IVI9 506 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 MNTQ99583 582 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 CLIC5Q9NZA1 410 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 IP6K2Q9UHH9 426 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 ASB1Q9Y576 335 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 KAT6BQ8WYB5 2073 aa6.95□□□□□ -1.3
NUP58-209ENST00000476553 APAF1O14727 1248 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 NBNO60934 754 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms