RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 SPATA31D4Q6ZUB0 917 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 TAS1R1Q7RTX1 841 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 CACNA2D4Q7Z3S7 1137 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 DGKHQ86XP1 1220 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 SAMD3Q8N6K7 520 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 IGDCC4Q8TDY8 1250 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 SEPT1Q8WYJ6 367 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 BRF1Q92994 677 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 RPS6KC1Q96S38 1066 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 ZSCAN10Q96SZ4 725 aaPredicted RBP7.31□□□□□ -1.24
CLDN4-205ENST00000476494 SLKQ9H2G2 1235 aaPredicted RBP7.31□□□□□ -1.24
CLDN4-205ENST00000476494 SMARCAD1Q9H4L7 1026 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 JMJD4Q9H9V9 463 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 JADE2Q9NQC1 790 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 CHMP5Q9NZZ3 219 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 DKK4Q9UBT3 224 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 DNAJB4Q9UDY4 337 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 TPCN1Q9ULQ1 816 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 KIF3AQ9Y496 699 aa7.31□□□□□ -1.24
CLDN4-205ENST00000476494 NEDD4P46934 1319 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 GOLGA4Q13439 2230 aaKnown RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CCDC163A0A0D9SF12 145 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CCDC196A0A1B0GTZ2 297 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 SPAARA0A1B0GVQ0 90 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 BCLAF3A2AJT9 711 aaKnown RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CCDC69A6NI79 296 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 MAN2B1O00754 1011 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 ZC3H11AO75152 810 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 ECI2O75521 394 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 STAM2O75886 525 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CDKL5O76039 1030 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 GLUD1P00367 558 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 KCNA2P16389 499 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 PDCP20941 246 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 PDIA3P30101 505 aaKnown RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CRYBB1P53674 252 aaPredicted RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 ANTXR2P58335 489 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 FAM193AP78312 1265 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 NUCB2P80303 420 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 SP4Q02446 784 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 ME3Q16798 604 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 PLK5Q496M5 336 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 ODR4Q5SWX8 454 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CPLX2Q6PUV4 134 aaKnown RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CCNI2Q6ZMN8 369 aaPredicted RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 NFXL1Q6ZNB6 911 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CYB5R4Q7L1T6 521 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 GRASPQ7Z6J2 395 aaPredicted RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 MAP4K3Q8IVH8 894 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 ABI1Q8IZP0 508 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 ITFG1Q8TB96 612 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 MDM1Q8TC05 714 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 DNASE1L2Q92874 299 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 PHKBQ93100 1093 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 GTF3C6Q969F1 213 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 MKNK1Q9BUB5 465 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 PHF20Q9BVI0 1012 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 MRPL9Q9BYD2 267 aaKnown RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 DUSP15Q9H1R2 295 aaPredicted RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 PLEKHA4Q9H4M7 779 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 CCDC86Q9H6F5 360 aaKnown RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 MRPL17Q9NRX2 175 aaKnown RBP7.3□□□□□ -1.24
CLDN4-205ENST00000476494 TBC1D13Q9NVG8 400 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 RTEL1Q9NZ71 1219 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 SLC12A7Q9Y666 1083 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 NOTCH2Q04721 2471 aa7.3□□□□□ -1.24
CLDN4-205ENST00000476494 KNTC1P50748 2209 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 RELNP78509 3460 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 BAZ2BQ9UIF8 2168 aaKnown RBP7.29□□□□□ -1.24
CLDN4-205ENST00000476494 KLF18A0A0U1RQI7 1052 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 CARNS1A5YM72 827 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 MEIS3P2A8K0S8 358 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 ZBTB42B2RXF5 422 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 H0Y626 953 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 ZBTB43O43298 467 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 TGM5O43548 720 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 ZMYND10O75800 440 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 RPP40O75818 363 aaKnown RBP7.29□□□□□ -1.24
CLDN4-205ENST00000476494 TRIM16O95361 564 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 NTRK1P04629 796 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 SSBP05455 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
CLDN4-205ENST00000476494 ADH1AP07327 375 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 KLRC1P26715 233 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 DDIT3P35638 169 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 HMGN5P82970 282 aaKnown RBP7.29□□□□□ -1.24
CLDN4-205ENST00000476494 SEC23AQ15436 765 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 Q6ZS52 159 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 CATIPQ7Z7H3 387 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 NPAS3Q8IXF0 933 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 FAM3CQ92520 227 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 MTMR8Q96EF0 704 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 TCEANC2Q96MN5 208 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 MBOAT7Q96N66 472 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 MAP3K14Q99558 947 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 OSMRQ99650 979 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 PIDD1Q9HB75 910 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 LY9Q9HBG7 655 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 TMEM9BQ9NQ34 198 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 TRPV5Q9NQA5 729 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 DPP7Q9UHL4 492 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms