RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RUFY4Q6ZNE9 571 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 PBKQ96KB5 322 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 LRRC27Q9C0I9 530 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 GRHL1Q9NZI5 618 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 RGL1Q9NZL6 768 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 FAM198AQ9UFP1 575 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 RPTORQ8N122 1335 aa9.01□□□□□ -0.97
VAPB-205ENST00000476395 FER1L6Q2WGJ9 1857 aa9□□□□□ -0.97
VAPB-205ENST00000476395 LOXHD1Q8IVV2 1947 aa9□□□□□ -0.97
VAPB-205ENST00000476395 POLRMTO00411 1230 aaKnown RBP9□□□□□ -0.97
VAPB-205ENST00000476395 CREB3O43889 395 aa9□□□□□ -0.97
VAPB-205ENST00000476395 GH1P01241 217 aa9□□□□□ -0.97
VAPB-205ENST00000476395 EEF2P13639 858 aaKnown RBP9□□□□□ -0.97
VAPB-205ENST00000476395 VCAM1P19320 739 aa9□□□□□ -0.97
VAPB-205ENST00000476395 CCND1P24385 295 aa9□□□□□ -0.97
VAPB-205ENST00000476395 CIITAP33076 1130 aa9□□□□□ -0.97
VAPB-205ENST00000476395 PCK1P35558 622 aa9□□□□□ -0.97
VAPB-205ENST00000476395 SREBF1P36956 1147 aa9□□□□□ -0.97
VAPB-205ENST00000476395 PTGIRP43119 386 aa9□□□□□ -0.97
VAPB-205ENST00000476395 MARCKSL1P49006 195 aa9□□□□□ -0.97
VAPB-205ENST00000476395 DUPD1Q68J44 220 aa9□□□□□ -0.97
VAPB-205ENST00000476395 TMEM154Q6P9G4 183 aa9□□□□□ -0.97
VAPB-205ENST00000476395 SEPT14Q6ZU15 432 aa9□□□□□ -0.97
VAPB-205ENST00000476395 C1orf186Q6ZWK4 172 aa9□□□□□ -0.97
VAPB-205ENST00000476395 ZSWIM2Q8NEG5 633 aa9□□□□□ -0.97
VAPB-205ENST00000476395 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9□□□□□ -0.97
VAPB-205ENST00000476395 GLG1Q92896 1179 aa9□□□□□ -0.97
VAPB-205ENST00000476395 RNF25Q96BH1 459 aaPredicted RBP9□□□□□ -0.97
VAPB-205ENST00000476395 SAMD15Q9P1V8 674 aa9□□□□□ -0.97
VAPB-205ENST00000476395 LNPEPQ9UIQ6 1025 aa9□□□□□ -0.97
VAPB-205ENST00000476395 SLC26A4O43511 780 aa9□□□□□ -0.97
VAPB-205ENST00000476395 SCNN1DP51172 638 aa9□□□□□ -0.97
VAPB-205ENST00000476395 CACNB3P54284 484 aa9□□□□□ -0.97
VAPB-205ENST00000476395 RAD23BP54727 409 aa9□□□□□ -0.97
VAPB-205ENST00000476395 NPEPPSP55786 919 aa9□□□□□ -0.97
VAPB-205ENST00000476395 ROR2Q01974 943 aaKnown RBP9□□□□□ -0.97
VAPB-205ENST00000476395 CUL1Q13616 776 aa9□□□□□ -0.97
VAPB-205ENST00000476395 EXOC3L4Q17RC7 722 aa9□□□□□ -0.97
VAPB-205ENST00000476395 C10orf76Q5T2E6 689 aa9□□□□□ -0.97
VAPB-205ENST00000476395 PHLDB3Q6NSJ2 640 aa9□□□□□ -0.97
VAPB-205ENST00000476395 RINT1Q6NUQ1 792 aa9□□□□□ -0.97
VAPB-205ENST00000476395 TTC27Q6P3X3 843 aa9□□□□□ -0.97
VAPB-205ENST00000476395 B3GNT9Q6UX72 402 aa9□□□□□ -0.97
VAPB-205ENST00000476395 TTC8Q8TAM2 541 aa9□□□□□ -0.97
VAPB-205ENST00000476395 GDAP1Q8TB36 358 aa9□□□□□ -0.97
VAPB-205ENST00000476395 INTS9Q9NV88 658 aaKnown RBP9□□□□□ -0.97
VAPB-205ENST00000476395 RGS17Q9UGC6 210 aaPredicted RBP9□□□□□ -0.97
VAPB-205ENST00000476395 PCDHA1Q9Y5I3 950 aa9□□□□□ -0.97
VAPB-205ENST00000476395 GTPBP10A4D1E9 387 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 TCP11X1B4DZS4 312 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 PGRMC1O00264 195 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 SLC16A3O15427 465 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 SNX3O60493 162 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SLITRK3O94933 977 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 FERP16591 822 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 NMT1P30419 496 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 ERFP50548 548 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 TNNC1P63316 161 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 TNIP1Q15025 636 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SIX1Q15475 284 aaPredicted RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 NFIL3Q16649 462 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 PRR16Q569H4 304 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 GPATCH4Q5T3I0 446 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 AGBL2Q5U5Z8 902 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 TATDN1Q6P1N9 297 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 GLYCTKQ8IVS8 523 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SLC35G2Q8TBE7 412 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 PLEKHO2Q8TD55 490 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 DDX23Q9BUQ8 820 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 METTL14Q9HCE5 456 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 TYW1Q9NV66 732 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 GCNT4Q9P109 453 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 ARMCX3Q9UH62 379 aaPredicted RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 BRWD3Q6RI45 1802 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 A0A1W2PRG0 241 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 ANKRD63C9JTQ0 380 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 KRIT1O00522 736 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 GFPT2O94808 682 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SPATA31D3P0C874 917 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SLC15A2Q16348 729 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 TRAPPC3LQ5T215 181 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 POTEAQ6S8J7 498 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SPATA31D4Q6ZUB0 917 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SPATA21Q7Z572 469 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 CCNJLQ8IV13 435 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 DAW1Q8N136 415 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 TTC30BQ8N4P2 665 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 MORC4Q8TE76 937 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 LRRC45Q96CN5 670 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 OLFML3Q9NRN5 406 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 PSME4Q14997 1843 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 TCRBV7S2A1N4TA0A589 114 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 CETN3O15182 167 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 FGFR4P22455 802 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 SP100P23497 879 aaPredicted RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 ZNF131P52739 623 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 PTENP60484 403 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 COPS2P61201 443 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 DLG4P78352 724 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 MAPK7Q13164 816 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms