RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 METTL24Q5JXM2 366 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 EPM2AIP1Q7L775 607 aaPredicted RBP14.76□□□□□ -0.05
HDAC1-206ENST00000476391 TTC5Q8N0Z6 440 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 MCUR1Q96AQ8 359 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 FNBP1Q96RU3 617 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
HDAC1-206ENST00000476391 PRDM16Q9HAZ2 1276 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 GYG2O15488 501 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 PRKAB2O43741 272 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 STRNO43815 780 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 CDH16O75309 829 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 CTNNA2P26232 953 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 WDR4P57081 412 aaKnown RBP14.76□□□□□ -0.05
HDAC1-206ENST00000476391 CALCOCO2Q13137 446 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 HNRNPDQ14103 355 aaKnown RBP14.76□□□□□ -0.05
HDAC1-206ENST00000476391 B3GNT6Q6ZMB0 384 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 NLRP9Q7RTR0 991 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 CCDC25Q86WR0 208 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 SCUBE1Q8IWY4 988 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 ARHGEF1Q92888 912 aaKnown RBP14.76□□□□□ -0.05
HDAC1-206ENST00000476391 CALML4Q96GE6 196 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 SETDB2Q96T68 719 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 BTBD7Q9P203 1132 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 PPP1R9AQ9ULJ8 1098 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 NCANO14594 1321 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 CAMTA1Q9Y6Y1 1673 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 BAZ2BQ9UIF8 2168 aaKnown RBP14.75□□□□□ -0.05
HDAC1-206ENST00000476391 M0R2N6 131 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 TRAF5O00463 557 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 RNASEH1O60930 286 aaKnown RBP14.75□□□□□ -0.05
HDAC1-206ENST00000476391 VARSP26640 1264 aaKnown RBP14.75□□□□□ -0.05
HDAC1-206ENST00000476391 TXKP42681 527 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 SLC18A1P54219 525 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 CCDC137Q6PK04 289 aaKnown RBP14.75□□□□□ -0.05
HDAC1-206ENST00000476391 PHLDB2Q86SQ0 1253 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 SLF2Q8IX21 1173 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 SRRM1Q8IYB3 904 aaKnown RBP14.75□□□□□ -0.05
HDAC1-206ENST00000476391 ARHGAP24Q8N264 748 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 PDCD7Q8N8D1 485 aaKnown RBP14.75□□□□□ -0.05
HDAC1-206ENST00000476391 PRELID2Q8N945 189 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 KCNH5Q8NCM2 988 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 PIP4K2CQ8TBX8 421 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 RFFLQ8WZ73 363 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 NMD3Q96D46 503 aaKnown RBP14.75□□□□□ -0.05
HDAC1-206ENST00000476391 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 TTC4O95801 387 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 CPA3P15088 417 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 MLH1P40692 756 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 SPARCL1Q14515 664 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 PDK4Q16654 411 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 TCERG1LQ5VWI1 586 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 MYOCDQ8IZQ8 938 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 VPS52Q8N1B4 723 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 CYLDQ9NQC7 956 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 ZDHHC7Q9NXF8 308 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 TMEM2Q9UHN6 1383 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 TMEM98Q9Y2Y6 226 aa14.75□□□□□ -0.05
HDAC1-206ENST00000476391 MYMKA6NI61 221 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 RGL2O15211 777 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 TPD52L2O43399 206 aaKnown RBP14.74□□□□□ -0.05
HDAC1-206ENST00000476391 OPHN1O60890 802 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 OR52Z1P0C646 297 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 SMARCA1P28370 1054 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 SERPINB8P50452 374 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 IFIT5Q13325 482 aaKnown RBP14.74□□□□□ -0.05
HDAC1-206ENST00000476391 DCTN2Q13561 401 aaKnown RBP14.74□□□□□ -0.05
HDAC1-206ENST00000476391 DNAAF5Q86Y56 855 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 PTCD3Q96EY7 689 aaKnown RBP14.74□□□□□ -0.05
HDAC1-206ENST00000476391 WASF2Q9Y6W5 498 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 UCHL3P15374 230 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 GALCP54803 685 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 CDC16Q13042 620 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 PPP2R5CQ13362 524 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 CYP4X1Q8N118 509 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 LCORLQ8N3X6 602 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 SLC35G2Q8TBE7 412 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 SLCO1B3Q9NPD5 702 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 UBN1Q9NPG3 1134 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 EMILIN3Q9NT22 766 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 CLIC5Q9NZA1 410 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 TMED5Q9Y3A6 229 aa14.74□□□□□ -0.05
HDAC1-206ENST00000476391 WDR46O15213 610 aaKnown RBP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 TMEM253P0C7T8 217 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 CDK4P11802 303 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 ANPEPP15144 967 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 PORP16435 677 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 RAP1GDS1P52306 607 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 EMP3P54852 163 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 ZNF211Q13398 564 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 THOC5Q13769 683 aaKnown RBP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 ADRM1Q16186 407 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 CYP1B1Q16678 543 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 KYNUQ16719 465 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 EXOC3L4Q17RC7 722 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 RBM26Q5T8P6 1007 aaKnown RBP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 TTC27Q6P3X3 843 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 MTDHQ86UE4 582 aaKnown RBP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 SATL1Q86VE3 508 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 SCYL3Q8IZE3 742 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms