RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	TCF25	Q9BQ70	676 aa		18.23	■□□□□ 0.51
VPS8-222	ENST00000475580	TMEM175	Q9BSA9	504 aa		18.23	■□□□□ 0.51
VPS8-222	ENST00000475580	CXCL16	Q9H2A7	254 aa		18.23	■□□□□ 0.51
VPS8-222	ENST00000475580	KMT5A	Q9NQR1	393 aa		18.23	■□□□□ 0.51
VPS8-222	ENST00000475580	PUF60	Q9UHX1	559 aa	Known RBP	18.23	■□□□□ 0.51
VPS8-222	ENST00000475580	HIDE1	A8MVS5	230 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	SLC16A4	O15374	487 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	GLP2R	O95838	553 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	HSP90AA1	P07900	732 aa	Known RBP	18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	ZSCAN22	P10073	491 aa	Predicted RBP	18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	DUSP6	Q16828	381 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	ATF7IP2	Q5U623	682 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	HACE1	Q8IYU2	909 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	EFHB	Q8N7U6	833 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	TMEM161B	Q8NDZ6	487 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	LARP4B	Q92615	738 aa	Known RBP	18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	PPP2R3C	Q969Q6	453 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	TMEM169	Q96HH4	297 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	ACO2	Q99798	780 aa	Known RBP	18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	REEP2	Q9BRK0	252 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	PTPRH	Q9HD43	1115 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	ENTPD7	Q9NQZ7	604 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	SNTG2	Q9NY99	539 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	KLK14	Q9P0G3	267 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	TNFSF13B	Q9Y275	285 aa		18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	RBM19	Q9Y4C8	960 aa	Known RBP	18.22	■□□□□ 0.51
VPS8-222	ENST00000475580	CARNS1	A5YM72	827 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	ABLIM1	O14639	778 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	NRP1	O14786	923 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	PER2	O15055	1255 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	F13A1	P00488	732 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	GIT2	Q14161	759 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	DHX8	Q14562	1220 aa	Known RBP	18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	TMEM132A	Q24JP5	1023 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	DCAF4L1	Q3SXM0	396 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	EP400NL	Q6ZTU2	488 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	DDX53	Q86TM3	631 aa	Known RBP	18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	KRI1	Q8N9T8	703 aa	Known RBP	18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	VN1R2	Q8NFZ6	395 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	NECAB3	Q96P71	396 aa	Predicted RBP	18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	TARS2	Q9BW92	718 aa	Known RBP	18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	ZBP1	Q9H171	429 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	TLE6	Q9H808	572 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	NGRN	Q9NPE2	291 aa	Known RBP	18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	MARCH5	Q9NX47	278 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	TFIP11	Q9UBB9	837 aa	Known RBP	18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	PARP2	Q9UGN5	583 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580	ODF2L	Q9ULJ1	636 aa		18.21	■□□□□ 0.51
VPS8-222	ENST00000475580		A0A087X0B3	334 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	C2orf71	A6NGG8	1288 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	RECQL4	O94761	1208 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	MAPT	P10636	758 aa	Known RBP	18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	PDIA4	P13667	645 aa	Known RBP	18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	PROZ	P22891	400 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	DDIT3	P35638	169 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	ZNF131	P52739	623 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	NCKAP1L	P55160	1127 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	RBM10	P98175	930 aa	Known RBP	18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	KCNC3	Q14003	757 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	TMC7	Q7Z402	723 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	RASSF8	Q8NHQ8	419 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	KCNN1	Q92952	543 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	MSLNL	Q96KJ4	702 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	ZNF396	Q96N95	335 aa	Predicted RBP	18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	FAM193B	Q96PV7	902 aa	Predicted RBP	18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	UHRF1	Q96T88	793 aa	Predicted RBP	18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	ADPGK	Q9BRR6	497 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	MRPL4	Q9BYD3	311 aa	Known RBP	18.2	■□□□□ 0.5
VPS8-222	ENST00000475580	CLEC1B	Q9P126	229 aa		18.2	■□□□□ 0.5
VPS8-222	ENST00000475580		F8W810	466 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	PTGES	O14684	152 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	EFEMP2	O95967	443 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	ALDH2	P05091	517 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	IL9	P15248	144 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	GRIK3	Q13003	919 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	SMC1A	Q14683	1233 aa	Known RBP	18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	STK38	Q15208	465 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	NAB2	Q15742	525 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	VPS52	Q8N1B4	723 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	MRPL43	Q8N983	215 aa	Known RBP	18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	FIZ1	Q96SL8	496 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	CDCA3	Q99618	268 aa	Predicted RBP	18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	CDT1	Q9H211	546 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	FAN1	Q9Y2M0	1017 aa		18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	PRG3	Q9Y2Y8	225 aa	Predicted RBP	18.19	■□□□□ 0.5
VPS8-222	ENST00000475580	GRXCR2	A6NFK2	248 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	SPTLC2	O15270	562 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	CTSA	P10619	480 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	OR1G1	P47890	313 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	SMTN	P53814	917 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	CLUL1	Q15846	466 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	RNF168	Q8IYW5	571 aa	Predicted RBP	18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	CEP120	Q8N960	986 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	AUTS2	Q8WXX7	1259 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	LARS	Q9P2J5	1176 aa	Known RBP	18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	STK17A	Q9UEE5	414 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	CCDC39	Q9UFE4	941 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	KCNG1	Q9UIX4	513 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms