RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 USP49Q70CQ1 688 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 SMG8Q8ND04 991 aaKnown RBP17.22■□□□□ 0.35
CPSF3-203ENST00000475482 DHX58Q96C10 678 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
CPSF3-203ENST00000475482 CDCA3Q99618 268 aaPredicted RBP17.22■□□□□ 0.35
CPSF3-203ENST00000475482 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
CPSF3-203ENST00000475482 IGFLR1Q9H665 355 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 NGRNQ9NPE2 291 aaKnown RBP17.22■□□□□ 0.35
CPSF3-203ENST00000475482 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 FSD2A1L4K1 749 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 INO80B-WBP1J3KQ70 363 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 MBTPS2O43462 519 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 B4GALT3O60512 393 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 ERLIN2O94905 339 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 GALTP07902 379 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 ARF4P18085 180 aaPredicted RBP17.21■□□□□ 0.35
CPSF3-203ENST00000475482 ALDH7A1P49419 539 aaKnown RBP17.21■□□□□ 0.35
CPSF3-203ENST00000475482 AFF1P51825 1210 aaKnown RBP17.21■□□□□ 0.35
CPSF3-203ENST00000475482 KRT17Q04695 432 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 SMAD4Q13485 552 aaKnown RBP17.21■□□□□ 0.35
CPSF3-203ENST00000475482 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
CPSF3-203ENST00000475482 FAM187BQ17R55 369 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 NOTUMQ6P988 496 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 PADI6Q6TGC4 694 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 TMEM173Q86WV6 379 aaPredicted RBP17.21■□□□□ 0.35
CPSF3-203ENST00000475482 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 VN1R2Q8NFZ6 395 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 MICAL1Q8TDZ2 1067 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 EIF2AQ9BY44 585 aaKnown RBP17.21■□□□□ 0.35
CPSF3-203ENST00000475482 PANK2Q9BZ23 570 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 FZD8Q9H461 694 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 TLE6Q9H808 572 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 RSAD1Q9HA92 442 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 KIAA1468Q9P260 1216 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 PRKAG3Q9UGI9 489 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 FAM50BQ9Y247 325 aa17.21■□□□□ 0.35
CPSF3-203ENST00000475482 TDRD15B5MCY1 1934 aaKnown RBP17.2■□□□□ 0.34
CPSF3-203ENST00000475482 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 C19orf67A6NJJ6 358 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
CPSF3-203ENST00000475482 SMC2O95347 1197 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 MYL1P05976 194 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
CPSF3-203ENST00000475482 EP400NLQ6ZTU2 488 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 RBM23Q86U06 439 aaKnown RBP17.2■□□□□ 0.34
CPSF3-203ENST00000475482 MRPL43Q8N983 215 aaKnown RBP17.2■□□□□ 0.34
CPSF3-203ENST00000475482 SMRP1Q8NCR6 262 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 BSNDQ8WZ55 320 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 KHSRPQ92945 711 aaKnown RBP eCLIP17.2■□□□□ 0.34
CPSF3-203ENST00000475482 TCF25Q9BQ70 676 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 LRRC27Q9C0I9 530 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 STK17AQ9UEE5 414 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 CD207Q9UJ71 328 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 IPPQ9Y573 584 aa17.2■□□□□ 0.34
CPSF3-203ENST00000475482 ARHGEF35A5YM69 484 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 HIDE1A8MVS5 230 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 NT5C1B-RDH14C9J2C7 533 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 PER2O15055 1255 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 DDHD2O94830 711 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 CCT6AP40227 531 aaKnown RBP17.19■□□□□ 0.34
CPSF3-203ENST00000475482 AMPD3Q01432 767 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 ZP2Q05996 745 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 KARSQ15046 597 aaKnown RBP17.19■□□□□ 0.34
CPSF3-203ENST00000475482 POSTNQ15063 836 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 ZNF280BQ86YH2 543 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 GJD3Q8N144 294 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 IGSF21Q96ID5 467 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 CPB2Q96IY4 423 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 MMTAG2Q9BU76 263 aaKnown RBP17.19■□□□□ 0.34
CPSF3-203ENST00000475482 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 UBN1Q9NPG3 1134 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 DNAJB4Q9UDY4 337 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 IRAK3Q9Y616 596 aa17.19■□□□□ 0.34
CPSF3-203ENST00000475482 ZMYM2Q9UBW7 1377 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 B4GALT5O43286 388 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 ZC3H11AO75152 810 aaKnown RBP eCLIP17.18■□□□□ 0.34
CPSF3-203ENST00000475482 NDUFV1P49821 464 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 TYRO3Q06418 890 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
CPSF3-203ENST00000475482 E2F4Q16254 413 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 STX1AQ16623 288 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 PLPP4Q5VZY2 271 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 MAEAQ7L5Y9 396 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 DDX53Q86TM3 631 aaKnown RBP17.18■□□□□ 0.34
CPSF3-203ENST00000475482 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 BCL7CQ8WUZ0 217 aaPredicted RBP17.18■□□□□ 0.34
CPSF3-203ENST00000475482 TMEM169Q96HH4 297 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 TMEM175Q9BSA9 504 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 ZBP1Q9H171 429 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 ANO10Q9NW15 660 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 INPP5FQ9Y2H2 1132 aa17.18■□□□□ 0.34
CPSF3-203ENST00000475482 A0A087X0B3 334 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms