RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 DEPTORQ8TB45 409 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 KIF12Q96FN5 646 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 AK8Q96MA6 479 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 FAM193BQ96PV7 902 aaPredicted RBP12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 TCF25Q9BQ70 676 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 NT5C3AQ9H0P0 336 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 TLE6Q9H808 572 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 ENTPD7Q9NQZ7 604 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 IPPQ9Y573 584 aa12.69□□□□□ -0.38
HLA-DOB-208ENST00000475235 NLRC5Q86WI3 1866 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 VPS37CA5D8V6 355 aaPredicted RBP12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 GRXCR2A6NFK2 248 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 MEIS3P2A8K0S8 358 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 PP2D1A8MPX8 630 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 GABBR2O75899 941 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 SRGAP2BP0DMP2 458 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 LTBRP36941 435 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 NRIP1P48552 1158 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 NDUFV1P49821 464 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 EFNA5P52803 228 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 ERVFC1P60507 584 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 MAPK6Q16659 721 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 TMC7Q7Z402 723 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 ADGRD2Q7Z7M1 963 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 SMG8Q8ND04 991 aaKnown RBP12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 CPB2Q96IY4 423 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 TIPINQ9BVW5 301 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 EIF2AQ9BY44 585 aaKnown RBP12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 FZD8Q9H461 694 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 NRDE2Q9H7Z3 1164 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 FRMD4BQ9Y2L6 1034 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 GIT1Q9Y2X7 761 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 REV3LO60673 3130 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 PHLPP2Q6ZVD8 1323 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 LOXHD1Q8IVV2 1947 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 ZMYM2Q9UBW7 1377 aa12.68□□□□□ -0.38
HLA-DOB-208ENST00000475235 KLHL33A6NCF5 533 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 E9PMD0 336 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 DYNC1I1O14576 645 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 INPPL1O15357 1258 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 B4GALT5O43286 388 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 SLC26A4O43511 780 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 GALTP07902 379 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 DUSP6Q16828 381 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 HYIQ5T013 277 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 PLPP4Q5VZY2 271 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 RBM23Q86U06 439 aaKnown RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 DRC1Q96MC2 740 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 NECAB3Q96P71 396 aaPredicted RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 MYO9BQ13459 2157 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 ACKR2O00590 384 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 N4BP3O15049 544 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 TBX10O75333 385 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 ALDH2P05091 517 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 PRKCBP05771 671 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 IL9P15248 144 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 CDC25AP30304 524 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 CD151P48509 253 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 SMAD4Q13485 552 aaKnown RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 PRPF4BQ13523 1007 aaKnown RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 GIT2Q14161 759 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 LSM14AQ8ND56 463 aaKnown RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 BSNDQ8WZ55 320 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 BORCS6Q96GS4 357 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 ADPGKQ9BRR6 497 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 SUDS3Q9H7L9 328 aaPredicted RBP12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 C17orf75Q9HAS0 396 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 KCND2Q9NZV8 630 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 PRKAG3Q9UGI9 489 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 CD207Q9UJ71 328 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
HLA-DOB-208ENST00000475235 ARID2Q68CP9 1835 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 ARL5CA6NH57 179 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 NT5C1B-RDH14C9J2C7 533 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 LINC01565O15544 149 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 NR1I2O75469 434 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 NPTXRO95502 500 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 POMCP01189 267 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 PYGBP11216 843 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 MLH1P40692 756 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 DLX2Q07687 328 aaPredicted RBP12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 DMP1Q13316 513 aaPredicted RBP12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 DDX53Q86TM3 631 aaKnown RBP12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 ZNF280BQ86YH2 543 aa12.66□□□□□ -0.38
HLA-DOB-208ENST00000475235 MRPL43Q8N983 215 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms