RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 COLEC11Q9BWP8 271 aa27.67■■■□□ 2.02
TMEM54-205ENST00000475208 WDR6Q9NNW5 1121 aaKnown RBP27.67■■■□□ 2.02
TMEM54-205ENST00000475208 IGSF9Q9P2J2 1179 aa27.67■■■□□ 2.02
TMEM54-205ENST00000475208 FBXL21Q9UKT6 434 aa27.67■■■□□ 2.02
TMEM54-205ENST00000475208 CLUHO75153 1309 aa27.67■■■□□ 2.02
TMEM54-205ENST00000475208 B4GALT5O43286 388 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 RFPL2O75678 378 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 FDPSP14324 419 aaKnown RBP27.66■■■□□ 2.02
TMEM54-205ENST00000475208 GLRA2P23416 452 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 GBP2P32456 591 aaPredicted RBP27.66■■■□□ 2.02
TMEM54-205ENST00000475208 RARRES1P49788 294 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 ANKRD1Q15327 319 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 CYP26C1Q6V0L0 522 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 ASCL5Q7RTU5 278 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 STAMQ92783 540 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 NFKBIZQ9BYH8 718 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 RHOBTB2Q9BYZ6 727 aa27.66■■■□□ 2.02
TMEM54-205ENST00000475208 TTC12Q9H892 705 aaPredicted RBP27.66■■■□□ 2.02
TMEM54-205ENST00000475208 NPTXRO95502 500 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 NPR3P17342 541 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 AOC1P19801 751 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 AKAP5P24588 427 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 FUT10Q6P4F1 479 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 CDR2LQ86X02 465 aaPredicted RBP27.65■■■□□ 2.02
TMEM54-205ENST00000475208 SIX5Q8N196 739 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 NECAB1Q8N987 351 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 GSTCDQ8NEC7 633 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 SMG7Q92540 1137 aaKnown RBP27.65■■■□□ 2.02
TMEM54-205ENST00000475208 B3GALT6Q96L58 329 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 POLR3FQ9H1D9 316 aaPredicted RBP27.65■■■□□ 2.02
TMEM54-205ENST00000475208 CHST7Q9NS84 486 aa27.65■■■□□ 2.02
TMEM54-205ENST00000475208 PRR23AA6NEV1 266 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 PI15O43692 258 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 NARSO43776 548 aaKnown RBP27.64■■■□□ 2.02
TMEM54-205ENST00000475208 NEMFO60524 1076 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 SPATA31D3P0C874 917 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 TXKP42681 527 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 SLC27A1Q6PCB7 646 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 SPATA31D4Q6ZUB0 917 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 PIGOQ8TEQ8 1089 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 GPR62Q9BZJ7 368 aa27.64■■■□□ 2.02
TMEM54-205ENST00000475208 WNT7AO00755 349 aa27.63■■■□□ 2.01
TMEM54-205ENST00000475208 USO1O60763 962 aaKnown RBP27.63■■■□□ 2.01
TMEM54-205ENST00000475208 GRIK3Q13003 919 aa27.63■■■□□ 2.01
TMEM54-205ENST00000475208 PALB2Q86YC2 1186 aa27.63■■■□□ 2.01
TMEM54-205ENST00000475208 RSAD2Q8WXG1 361 aa27.63■■■□□ 2.01
TMEM54-205ENST00000475208 ZNF707Q96C28 371 aaPredicted RBP27.63■■■□□ 2.01
TMEM54-205ENST00000475208 KLK14Q9P0G3 267 aa27.63■■■□□ 2.01
TMEM54-205ENST00000475208 ZMYM2Q9UBW7 1377 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 A0A087WWV3 80 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 BTBD18B2RXH4 712 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 LARGE1O95461 756 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 FOSBP53539 338 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 USP41Q3LFD5 358 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 GLYCTKQ8IVS8 523 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 HDAC7Q8WUI4 952 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 GTF3C6Q969F1 213 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 MYADMQ96S97 322 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 PLEKHA4Q9H4M7 779 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.62■■■□□ 2.01
TMEM54-205ENST00000475208 EPS15L1Q9UBC2 864 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 PARP2Q9UGN5 583 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 ADAM28Q9UKQ2 775 aa27.62■■■□□ 2.01
TMEM54-205ENST00000475208 A0A1B0GUA9 196 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 TGM5O43548 720 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 ANAPC15P60006 121 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 ME3Q16798 604 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 MAEAQ7L5Y9 396 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 FRMD5Q7Z6J6 570 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 DIS3L2Q8IYB7 885 aaKnown RBP27.61■■■□□ 2.01
TMEM54-205ENST00000475208 CCDC105Q8IYK2 499 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 RIN2Q8WYP3 895 aaPredicted RBP27.61■■■□□ 2.01
TMEM54-205ENST00000475208 RABGGTAQ92696 567 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 RTP3Q9BQQ7 232 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 PIDD1Q9HB75 910 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 GPRC5CQ9NQ84 441 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 FNIP2Q9P278 1114 aa27.61■■■□□ 2.01
TMEM54-205ENST00000475208 POTEMA6NI47 508 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 LRRIQ4A6NIV6 560 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 PAPLNO95428 1278 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 C1RP00736 705 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 CFHP08603 1231 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 RPL17P18621 184 aaKnown RBP27.6■■■□□ 2.01
TMEM54-205ENST00000475208 GPR65Q8IYL9 337 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 NSUN7Q8NE18 718 aaKnown RBP27.6■■■□□ 2.01
TMEM54-205ENST00000475208 MTMR9Q96QG7 549 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 NT5C3AQ9H0P0 336 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 ZDHHC7Q9NXF8 308 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 CACNG4Q9UBN1 327 aa27.6■■■□□ 2.01
TMEM54-205ENST00000475208 VPS13AQ96RL7 3174 aa27.59■■■□□ 2.01
TMEM54-205ENST00000475208 DMDP11532 3685 aa27.59■■■□□ 2.01
TMEM54-205ENST00000475208 SNX27Q96L92 541 aa27.59■■■□□ 2.01
TMEM54-205ENST00000475208 WNT16Q9UBV4 365 aa27.59■■■□□ 2.01
TMEM54-205ENST00000475208 PTPRZ1P23471 2315 aaPredicted RBP27.58■■■□□ 2.01
TMEM54-205ENST00000475208 TADA2AO75478 443 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 XRCC6P12956 609 aaKnown RBP eCLIP27.58■■■□□ 2.01
TMEM54-205ENST00000475208 CREMQ03060 361 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 TRIM29Q14134 588 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 HSP90AA2PQ14568 343 aaPredicted RBP27.58■■■□□ 2.01
TMEM54-205ENST00000475208 LILRA6Q6PI73 481 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms