RNA–Protein interactions for RNA: ENST00000474904.5

GPATCH4-206, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-206ENST00000474904 TNMDQ9H2S6 317 aa11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 NXF3Q9H4D5 531 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 NSUN3Q9H649 340 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 NRDE2Q9H7Z3 1164 aa11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
GPATCH4-206ENST00000474904 FAM237AA0A1B0GTK4 181 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 MYMKA6NI61 221 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 FSCN2O14926 492 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 TRAK2O60296 914 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 TOM1L1O75674 476 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 DDHD2O94830 711 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 NPTXRO95502 500 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 MCF2P10911 925 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 GAP43P17677 238 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 IBSPP21815 317 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 STAT6P42226 847 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 KRT85P78386 507 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 NUCB2P80303 420 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 CTC1Q2NKJ3 1217 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 XKR4Q5GH76 650 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 CDR2LQ86X02 465 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 ZNF280BQ86YH2 543 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 COLGALT2Q8IYK4 626 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 MYCT1Q8N699 235 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 IQUBQ8NA54 791 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 POF1BQ8WVV4 589 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 ATXN2LQ8WWM7 1075 aaKnown RBP11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 DDX12PQ92771 950 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 GAD1Q99259 594 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 PYM1Q9BRP8 204 aaKnown RBP11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 LRRC27Q9C0I9 530 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 OLFML3Q9NRN5 406 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 MIOSQ9NXC5 875 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 PUF60Q9UHX1 559 aaKnown RBP11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 HES2Q9Y543 173 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
GPATCH4-206ENST00000474904 B4GALT3O60512 393 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 PPP1R37O75864 691 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 FAM13AO94988 1023 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 ALDH2P05091 517 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 CMA1P23946 247 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 GRM5P41594 1212 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 ME1P48163 572 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 KRT17Q04695 432 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 GRIK3Q13003 919 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 STRN3Q13033 797 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 CCDC85BQ15834 202 aaPredicted RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 SPOUT1Q5T280 376 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 ZNF720Q7Z2F6 126 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 DDX53Q86TM3 631 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 THNSL1Q8IYQ7 743 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 HVCN1Q96D96 273 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 IGSF21Q96ID5 467 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 PANK2Q9BZ23 570 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 CDT1Q9H211 546 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 NGRNQ9NPE2 291 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 TLR9Q9NR96 1032 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 SNTG2Q9NY99 539 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 TBX20Q9UMR3 447 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 USP20Q9Y2K6 914 aa11.86□□□□□ -0.51
GPATCH4-206ENST00000474904 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 AKAP5P24588 427 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 MLH1P40692 756 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 SLC11A1P49279 550 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 ERVFC1P60507 584 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 AMPD3Q01432 767 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 RNASELQ05823 741 aaKnown RBP11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 MCL1Q07820 350 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 NAB2Q15742 525 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 FOXD4L6Q3SYB3 417 aaPredicted RBP11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 TCEAL5Q5H9L2 206 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 FOXD4L3Q6VB84 417 aaPredicted RBP11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 MAP4K3Q8IVH8 894 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 GPR65Q8IYL9 337 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 PDILTQ8N807 584 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 HLA-CQ95604 372 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 PPP2R3CQ969Q6 453 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 PABPC5Q96DU9 382 aaKnown RBP11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 TMEM169Q96HH4 297 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 FAM13BQ9NYF5 915 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 THEGQ9P2T0 379 aa11.85□□□□□ -0.51
GPATCH4-206ENST00000474904 DNAJB4Q9UDY4 337 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms