RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 HIC1Q14526 733 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 PCBP1Q15365 356 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATG4A-207ENST00000474825 SYCP1Q15431 976 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 KIAA0753Q2KHM9 967 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 CCDC40Q4G0X9 1142 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 C1orf220Q5T0J3 134 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 FKBP15Q5T1M5 1219 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 SMYD5Q6GMV2 418 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 FBXO46Q6PJ61 603 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-207ENST00000474825 TSHZ1Q6ZSZ6 1077 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 TMEM139Q8IV31 216 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 DRC7Q8IY82 874 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 NME8Q8N427 588 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 LRRC71Q8N4P6 559 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 RNF149Q8NC42 400 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 LMBR1Q8WVP7 490 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 LENG1Q96BZ8 264 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-207ENST00000474825 PRIMPOLQ96LW4 560 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 DNAJC7Q99615 494 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
ATG4A-207ENST00000474825 MTG1Q9BT17 334 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-207ENST00000474825 HAPLN2Q9GZV7 340 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 ADAMTS10Q9H324 1103 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 PLCB1Q9NQ66 1216 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 DDX20Q9UHI6 824 aaKnown RBP7.22□□□□□ -1.25
ATG4A-207ENST00000474825 FBXL5Q9UKA1 691 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 FRMD4BQ9Y2L6 1034 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 COQ4Q9Y3A0 265 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 DAAM1Q9Y4D1 1078 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATG4A-207ENST00000474825 ZSWIM8A7E2V4 1837 aa7.22□□□□□ -1.25
ATG4A-207ENST00000474825 TTC26A0AVF1 554 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 LRRIQ4A6NIV6 560 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 AKR1B15C9JRZ8 316 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 RNF225M0QZC1 329 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 EXTL3O43909 919 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 ZNF500O60304 480 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 ZEB2O60315 1214 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 STX10O60499 249 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 EXOC3O60645 756 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 MFAP3LO75121 409 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 GPR32O75388 356 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 TOM1L1O75674 476 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 NOL4O94818 638 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 LDHAP00338 332 aaKnown RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 RPLP2P05387 115 aaKnown RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 PTMAP06454 111 aaKnown RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 ADRB2P07550 413 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 IQCF3P0C7M6 154 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 GNAT1P11488 350 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 ELNP15502 786 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 CCND3P30281 292 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 FXR1P51114 621 aaKnown RBP eCLIP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 GPC3P51654 580 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 CLCN3P51790 818 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 CDK17Q00537 523 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 BEX3Q00994 111 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 PTPN11Q06124 597 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 RBL2Q08999 1139 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 STRN3Q13033 797 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SNRNP35Q16560 246 aaKnown RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 MEA1Q16626 185 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 MAPK6Q16659 721 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 GNASQ5JWF2 1037 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 NFRKBQ6P4R8 1299 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 CRELD2Q6UXH1 353 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 C15orf39Q6ZRI6 1047 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SRGAP1Q7Z6B7 1085 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 CNGA4Q8IV77 575 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 ZBTB8OSQ8IWT0 167 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 GPD1LQ8N335 351 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 CCDC112Q8NEF3 446 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 KIAA1524Q8TCG1 905 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 PLEKHO2Q8TD55 490 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 PARD3BQ8TEW8 1205 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SYN2Q92777 582 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 TSEN34Q9BSV6 310 aaKnown RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 TARS2Q9BW92 718 aaKnown RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 MRPL4Q9BYD3 311 aaKnown RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 MINDY3Q9H8M7 445 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SUGCTQ9HAC7 445 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SPC25Q9HBM1 224 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SETD4Q9NVD3 440 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 PRMT7Q9NVM4 692 aaPredicted RBP7.21□□□□□ -1.26
ATG4A-207ENST00000474825 TNFSF13BQ9Y275 285 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 TRIM17Q9Y577 477 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SIP14410 1827 aa7.21□□□□□ -1.26
ATG4A-207ENST00000474825 SCN10AQ9Y5Y9 1956 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 A0A087WZ62 844 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 ZNF233A6NK53 670 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 ESPNB1AK53 854 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 HNRNPDLO14979 420 aaKnown RBP7.2□□□□□ -1.26
ATG4A-207ENST00000474825 CABYRO75952 493 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 PRKCBP05771 671 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 GJB1P08034 283 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 MYL3P08590 195 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 C6orf222P0C671 652 aaPredicted RBP7.2□□□□□ -1.26
ATG4A-207ENST00000474825 SRGAP2CP0DJJ0 459 aa7.2□□□□□ -1.26
ATG4A-207ENST00000474825 PON1P27169 355 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms