RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 GPRC5CQ9NQ84 441 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 PRMT7Q9NVM4 692 aaPredicted RBP16.71■□□□□ 0.27
VARS-223ENST00000474643 GIT1Q9Y2X7 761 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 STK24Q9Y6E0 443 aa16.71■□□□□ 0.27
VARS-223ENST00000474643 TMEM221A6NGB7 291 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 M0R296 226 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 MED24O75448 989 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 BMP15O95972 392 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 EPCAMP16422 314 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 PRPHP41219 470 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 ZXDAP98168 799 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 PPP2R5AQ15172 486 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 PTPN14Q15678 1187 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 MAPK6Q16659 721 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 TRIM67Q6ZTA4 783 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
VARS-223ENST00000474643 C12orf76Q8N812 135 aaPredicted RBP16.7■□□□□ 0.26
VARS-223ENST00000474643 TDRD5Q8NAT2 981 aaKnown RBP16.7■□□□□ 0.26
VARS-223ENST00000474643 SMG8Q8ND04 991 aaKnown RBP16.7■□□□□ 0.26
VARS-223ENST00000474643 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
VARS-223ENST00000474643 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 NXF3Q9H4D5 531 aaKnown RBP16.7■□□□□ 0.26
VARS-223ENST00000474643 SFXN1Q9H9B4 322 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 DPP7Q9UHL4 492 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 MTMR6Q9Y217 621 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 IRAK3Q9Y616 596 aa16.7■□□□□ 0.26
VARS-223ENST00000474643 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 N4BP3O15049 544 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 B4GALT5O43286 388 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 SOD2P04179 222 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 ADH1AP07327 375 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 SPATA31C1P0DKV0 1188 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 AKAP5P24588 427 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 RPA1P27694 616 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 AFF1P51825 1210 aaKnown RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 ATP2C1P98194 919 aaPredicted RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 RESTQ13127 1097 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 PRPF4BQ13523 1007 aaKnown RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 PDIA5Q14554 519 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 ZRSR1Q15695 479 aaKnown RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 FOXD4L5Q5VV16 416 aaPredicted RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 KRT79Q5XKE5 535 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 PADI6Q6TGC4 694 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 TMC5Q6UXY8 1006 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 APBB1IPQ7Z5R6 666 aaPredicted RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 IFNLR1Q8IU57 520 aaPredicted RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 FOXD4L4Q8WXT5 416 aaPredicted RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 PRIMPOLQ96LW4 560 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 FBXL18Q96ME1 805 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 ZSCAN16Q9H4T2 348 aaPredicted RBP16.69■□□□□ 0.26
VARS-223ENST00000474643 POMKQ9H5K3 350 aa16.69■□□□□ 0.26
VARS-223ENST00000474643 WEE2P0C1S8 567 aa16.68■□□□□ 0.26
VARS-223ENST00000474643 GLUD2P49448 558 aa16.68■□□□□ 0.26
VARS-223ENST00000474643 CEBPZQ03701 1054 aaKnown RBP16.68■□□□□ 0.26
VARS-223ENST00000474643 SIGLEC14Q08ET2 396 aa16.68■□□□□ 0.26
VARS-223ENST00000474643 SF3A1Q15459 793 aaKnown RBP16.68■□□□□ 0.26
VARS-223ENST00000474643 PTPN21Q16825 1174 aa16.68■□□□□ 0.26
VARS-223ENST00000474643 ACSF2Q96CM8 615 aaPredicted RBP16.68■□□□□ 0.26
VARS-223ENST00000474643 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
VARS-223ENST00000474643 KLK14Q9P0G3 267 aa16.68■□□□□ 0.26
VARS-223ENST00000474643 CDH22Q9UJ99 828 aa16.68■□□□□ 0.26
VARS-223ENST00000474643 MYH15Q9Y2K3 1946 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 B4GALT3O60512 393 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 TADA2AO75478 443 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 PRKCBP05771 671 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 CNPP09543 421 aaKnown RBP16.67■□□□□ 0.26
VARS-223ENST00000474643 GRIK3Q13003 919 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 MTMR3Q13615 1198 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 AMHR2Q16671 573 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 ARL6IP4Q66PJ3 421 aaKnown RBP16.67■□□□□ 0.26
VARS-223ENST00000474643 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 CCDC149Q6ZUS6 474 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 KLHL5Q96PQ7 755 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 HERC2P3Q9BVR0 1158 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 BHMT2Q9H2M3 363 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
VARS-223ENST00000474643 A0A1B0GUA9 196 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 GLUD1P00367 558 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 CYP11B2P19099 503 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 MUTP22033 750 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 NAMPTP43490 491 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 CREMQ03060 361 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 PLCD3Q8N3E9 789 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 IGSF22Q8N9C0 903 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 KREMEN2Q8NCW0 462 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 KIFAP3Q92845 792 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 VN1R3Q9BXE9 311 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 KCNH6Q9H252 994 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 MAN1C1Q9NR34 630 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 DDX19AQ9NUU7 478 aaKnown RBP16.66■□□□□ 0.26
VARS-223ENST00000474643 SORCS3Q9UPU3 1222 aa16.66■□□□□ 0.26
VARS-223ENST00000474643 PP2D1A8MPX8 630 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 C2CD4DB7Z1M9 353 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 CDC25AP30304 524 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 CLCN4P51793 760 aa16.65■□□□□ 0.26
VARS-223ENST00000474643 EFNA5P52803 228 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 429 ms