RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TMEM143Q96AN5 459 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 PBKQ96KB5 322 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 FNBP1Q96RU3 617 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 MMS19Q96T76 1030 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 GOLGA8IPA6NC78 632 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 GOLGA8JA6NMD2 632 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 FOXN3O00409 490 aaPredicted RBP23.51■■□□□ 1.35
CCM2-206ENST00000474617 BUB1O43683 1085 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 HBP1O60381 514 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 PGK2P07205 417 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 TFDP1Q14186 410 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 SURF1Q15526 300 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 LY6KQ17RY6 165 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 C15orf39Q6ZRI6 1047 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 SLFN11Q7Z7L1 901 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 EMID1Q96A84 441 aaPredicted RBP23.51■■□□□ 1.35
CCM2-206ENST00000474617 SPATA33Q96N06 139 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 FAM53CQ9NYF3 392 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 CLEC11AQ9Y240 323 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 TELO2Q9Y4R8 837 aa23.51■■□□□ 1.35
CCM2-206ENST00000474617 A0A0B4J269 797 aa23.5■■□□□ 1.35
CCM2-206ENST00000474617 RBM47A0AV96 593 aaKnown RBP23.5■■□□□ 1.35
CCM2-206ENST00000474617 SOX10P56693 466 aa23.5■■□□□ 1.35
CCM2-206ENST00000474617 IRF5Q13568 498 aa23.5■■□□□ 1.35
CCM2-206ENST00000474617 ARHGAP44Q17R89 818 aa23.5■■□□□ 1.35
CCM2-206ENST00000474617 KRT222Q8N1A0 295 aa23.5■■□□□ 1.35
CCM2-206ENST00000474617 CCDC127Q96BQ5 260 aa23.5■■□□□ 1.35
CCM2-206ENST00000474617 FAM213AQ9BRX8 229 aa23.5■■□□□ 1.35
CCM2-206ENST00000474617 MRPL4Q9BYD3 311 aaKnown RBP23.5■■□□□ 1.35
CCM2-206ENST00000474617 PDHXO00330 501 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 TXNP10599 105 aaKnown RBP23.49■■□□□ 1.35
CCM2-206ENST00000474617 NOP2P46087 812 aaKnown RBP23.49■■□□□ 1.35
CCM2-206ENST00000474617 BPIFB4P59827 614 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 MAP2K1Q02750 393 aaPredicted RBP23.49■■□□□ 1.35
CCM2-206ENST00000474617 POU5F1BQ06416 359 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 RPS6KA1Q15418 735 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 ZNF792Q3KQV3 632 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 SV2AQ7L0J3 742 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 LRRC57Q8N9N7 239 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 TPCN2Q8NHX9 752 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 LNX1Q8TBB1 728 aaPredicted RBP23.49■■□□□ 1.35
CCM2-206ENST00000474617 SELENOOQ9BVL4 669 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 PACSIN1Q9BY11 444 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 SUCLA2Q9P2R7 463 aaPredicted RBP23.49■■□□□ 1.35
CCM2-206ENST00000474617 IVNS1ABPQ9Y6Y0 642 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 MYH10P35580 1976 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 SRGAP2O75044 1071 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 GALCP54803 685 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 CAPSQ13938 189 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 WDR44Q5JSH3 913 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 ZNF484Q5JVG2 852 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 WDR78Q5VTH9 848 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 PPP1R2P3Q6NXS1 205 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 ZNF677Q86XU0 584 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 GLYCTKQ8IVS8 523 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 ARHGEF19Q8IW93 802 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 MS4A4AQ96JQ5 239 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 CAPZA3Q96KX2 299 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 PARK7Q99497 189 aaKnown RBP23.49■■□□□ 1.35
CCM2-206ENST00000474617 NFKBIZQ9BYH8 718 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 ISCUQ9H1K1 167 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 C1orf112Q9NSG2 853 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 ZNF446Q9NWS9 450 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 ERAP1Q9NZ08 941 aa23.49■■□□□ 1.35
CCM2-206ENST00000474617 CCL15-CCL14A0A0B4J2E2 113 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 SORBS3O60504 671 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 PEX10O60683 326 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 TOM1L1O75674 476 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 ARIH2O95376 493 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 CCL15Q16663 113 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 ZACNQ401N2 412 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 ARMCX2Q7L311 632 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 PPM1KQ8N3J5 372 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 C2orf69Q8N8R5 385 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 NOA1Q8NC60 698 aaKnown RBP23.48■■□□□ 1.35
CCM2-206ENST00000474617 SPATA4Q8NEY3 305 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 OLIG1Q8TAK6 271 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 MSTO1Q9BUK6 570 aa23.48■■□□□ 1.35
CCM2-206ENST00000474617 COL1A2P08123 1366 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 RTN2O75298 545 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 GH1P01241 217 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 POU5F1Q01860 360 aaKnown RBP23.47■■□□□ 1.35
CCM2-206ENST00000474617 PLCB4Q15147 1175 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 HSDL1Q3SXM5 330 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 NFRKBQ6P4R8 1299 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 MAMDC4Q6UXC1 1216 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 EEPD1Q7L9B9 569 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 GPIHBP1Q8IV16 184 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 HELQQ8TDG4 1101 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 PRPF31Q8WWY3 499 aaKnown RBP23.47■■□□□ 1.35
CCM2-206ENST00000474617 GBA2Q9HCG7 927 aaPredicted RBP23.47■■□□□ 1.35
CCM2-206ENST00000474617 SLC5A4Q9NY91 659 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 RBAKQ9NYW8 714 aaPredicted RBP23.47■■□□□ 1.35
CCM2-206ENST00000474617 ZNFX1Q9P2E3 1918 aaKnown RBP23.47■■□□□ 1.35
CCM2-206ENST00000474617 ADGRA2Q96PE1 1338 aa23.47■■□□□ 1.35
CCM2-206ENST00000474617 MAGEB2O15479 319 aa23.46■■□□□ 1.35
CCM2-206ENST00000474617 LRRN2O75325 713 aa23.46■■□□□ 1.35
CCM2-206ENST00000474617 PNMA6AP0CW24 399 aaPredicted RBP23.46■■□□□ 1.35
CCM2-206ENST00000474617 PDE6CP51160 858 aa23.46■■□□□ 1.35
CCM2-206ENST00000474617 PRPF4BQ13523 1007 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms