RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 RASA3Q14644 834 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 PARP9Q8IXQ6 854 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 FAM71AQ8IYT1 594 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 PPM1KQ8N3J5 372 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 ACER1Q8TDN7 264 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 EPS8L3Q8TE67 593 aaKnown RBP15.12■□□□□ 0.01
RPGR-206ENST00000474584 ART4Q93070 314 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 MXRA8Q9BRK3 442 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 CD248Q9HCU0 757 aa15.12■□□□□ 0.01
RPGR-206ENST00000474584 CCT8L1PA6NM43 557 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 PMM2O15305 246 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 DNAJC8O75937 253 aaPredicted RBP15.11■□□□□ 0.01
RPGR-206ENST00000474584 ECEL1O95672 775 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 P4HBP07237 508 aaKnown RBP15.11■□□□□ 0.01
RPGR-206ENST00000474584 PLS3P13797 630 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 MFAP3P55082 362 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 SNRPFP62306 86 aaKnown RBP15.11■□□□□ 0.01
RPGR-206ENST00000474584 XRCC4Q13426 336 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 PPP1R7Q15435 360 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 ZDHHC14Q8IZN3 488 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 C12orf50Q8NA57 414 aaPredicted RBP15.11■□□□□ 0.01
RPGR-206ENST00000474584 ZNF653Q96CK0 615 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 PCDHB18PQ96TA0 734 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 MYCBPQ99417 103 aaPredicted RBP15.11■□□□□ 0.01
RPGR-206ENST00000474584 CCDC134Q9H6E4 229 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 GEMIN8Q9NWZ8 242 aaKnown RBP15.11■□□□□ 0.01
RPGR-206ENST00000474584 UVRAGQ9P2Y5 699 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 CHORDC1Q9UHD1 332 aaPredicted RBP15.11■□□□□ 0.01
RPGR-206ENST00000474584 GTF3C4Q9UKN8 822 aa15.11■□□□□ 0.01
RPGR-206ENST00000474584 CHRNB2P17787 502 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 SLCO1A2P46721 670 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 RWDD2BP57060 319 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 C1orf220Q5T0J3 134 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 UHMK1Q8TAS1 419 aaKnown RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 KAT5Q92993 513 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 ZKSCAN4Q969J2 545 aaPredicted RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 IWS1Q96ST2 819 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 PRMT1Q99873 361 aaKnown RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 TMEM117Q9H0C3 514 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 CCDC113Q9H0I3 377 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 TMOD2Q9NZR1 351 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 DBR1Q9UK59 544 aaKnown RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 CYP26A1O43174 497 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 ONECUT3O60422 494 aaPredicted RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 CYP1A2P05177 515 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 HMGB2P26583 209 aaKnown RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 MAP2K2P36507 400 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 PDE6CP51160 858 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 MFSD5Q6N075 450 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 RNF207Q6ZRF8 634 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 TRMT10CQ7L0Y3 403 aaKnown RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 FAM160B2Q86V87 743 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 SLC47A2Q86VL8 602 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 CCDC25Q86WR0 208 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 ROPN1BQ9BZX4 212 aaPredicted RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 ROPN1Q9HAT0 212 aaPredicted RBP15.1■□□□□ 0.01
RPGR-206ENST00000474584 PKD2L1Q9P0L9 805 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
RPGR-206ENST00000474584 TCRBV7S2A1N4TA0A589 114 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 TULP1O00294 542 aaPredicted RBP15.09■□□□□ 0.01
RPGR-206ENST00000474584 VIMP08670 466 aaKnown RBP15.09■□□□□ 0.01
RPGR-206ENST00000474584 RARAP10276 462 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 RARRES1P49788 294 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 GSCP56915 257 aaPredicted RBP15.09■□□□□ 0.01
RPGR-206ENST00000474584 HAUS6Q7Z4H7 955 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 PIGWQ7Z7B1 504 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 LDHDQ86WU2 507 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 LRRC34Q8IZ02 419 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 SHC3Q92529 594 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 TACO1Q9BSH4 297 aaKnown RBP15.09■□□□□ 0.01
RPGR-206ENST00000474584 HOMER3Q9NSC5 361 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 ZHX2Q9Y6X8 837 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 GSTA1P08263 222 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 ITGB5P18084 799 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 GTF2BQ00403 316 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 FMO1Q01740 532 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 AUHQ13825 339 aaKnown RBP15.09■□□□□ 0.01
RPGR-206ENST00000474584 TNFAIP8L3Q5GJ75 292 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 MEX3CQ5U5Q3 659 aaKnown RBP15.09■□□□□ 0.01
RPGR-206ENST00000474584 MIGA2Q7L4E1 593 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 BTBD6Q96KE9 485 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 PRMT6Q96LA8 375 aaPredicted RBP15.09■□□□□ 0.01
RPGR-206ENST00000474584 KREMEN1Q96MU8 473 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 ST6GALNAC4Q9H4F1 302 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 LRRC19Q9H756 370 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 KCNH7Q9NS40 1196 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 ZBTB21Q9ULJ3 1066 aa15.09■□□□□ 0.01
RPGR-206ENST00000474584 ANKRD63C9JTQ0 380 aa15.08■□□□□ 0
RPGR-206ENST00000474584 PLA2G6O60733 806 aa15.08■□□□□ 0
RPGR-206ENST00000474584 DLATP10515 647 aaKnown RBP15.08■□□□□ 0
RPGR-206ENST00000474584 CYP11B1P15538 503 aa15.08■□□□□ 0
RPGR-206ENST00000474584 ATP5DP30049 168 aa15.08■□□□□ 0
RPGR-206ENST00000474584 QARSP47897 775 aaKnown RBP15.08■□□□□ 0
RPGR-206ENST00000474584 KCNJ1P48048 391 aa15.08■□□□□ 0
RPGR-206ENST00000474584 CDR2Q01850 454 aa15.08■□□□□ 0
RPGR-206ENST00000474584 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
RPGR-206ENST00000474584 SIX1Q15475 284 aaPredicted RBP15.08■□□□□ 0
RPGR-206ENST00000474584 GRIPAP1Q4V328 841 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms