RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MRPS27Q92552 414 aaKnown RBP15.08■□□□□ 0
USF1-205ENST00000473969 DNAJC19Q96DA6 116 aa15.08■□□□□ 0
USF1-205ENST00000473969 CCDC94Q9BW85 323 aaPredicted RBP15.08■□□□□ 0
USF1-205ENST00000473969 GBP3Q9H0R5 595 aa15.08■□□□□ 0
USF1-205ENST00000473969 NXF3Q9H4D5 531 aaKnown RBP15.08■□□□□ 0
USF1-205ENST00000473969 CWH43Q9H720 699 aa15.08■□□□□ 0
USF1-205ENST00000473969 SERTAD1Q9UHV2 236 aa15.08■□□□□ 0
USF1-205ENST00000473969 PUF60Q9UHX1 559 aaKnown RBP15.08■□□□□ 0
USF1-205ENST00000473969 TBX20Q9UMR3 447 aa15.08■□□□□ 0
USF1-205ENST00000473969 EXOC7Q9UPT5 735 aa15.08■□□□□ 0
USF1-205ENST00000473969 PCDHB13Q9Y5F0 798 aa15.08■□□□□ 0
USF1-205ENST00000473969 MEIS3P2A8K0S8 358 aa15.07■□□□□ 0
USF1-205ENST00000473969 CLDN3O15551 220 aa15.07■□□□□ 0
USF1-205ENST00000473969 ZC3H11AO75152 810 aaKnown RBP eCLIP15.07■□□□□ 0
USF1-205ENST00000473969 TOM1L1O75674 476 aa15.07■□□□□ 0
USF1-205ENST00000473969 GCNT3O95395 438 aa15.07■□□□□ 0
USF1-205ENST00000473969 POMCP01189 267 aa15.07■□□□□ 0
USF1-205ENST00000473969 SLFN14P0C7P3 912 aa15.07■□□□□ 0
USF1-205ENST00000473969 MCF2P10911 925 aa15.07■□□□□ 0
USF1-205ENST00000473969 HARSP12081 509 aaKnown RBP15.07■□□□□ 0
USF1-205ENST00000473969 NMT1P30419 496 aaKnown RBP15.07■□□□□ 0
USF1-205ENST00000473969 MLH1P40692 756 aa15.07■□□□□ 0
USF1-205ENST00000473969 AFMP43652 599 aa15.07■□□□□ 0
USF1-205ENST00000473969 ALCAMQ13740 583 aa15.07■□□□□ 0
USF1-205ENST00000473969 ADGRE1Q14246 886 aa15.07■□□□□ 0
USF1-205ENST00000473969 EEF1DP3Q658K8 133 aa15.07■□□□□ 0
USF1-205ENST00000473969 KCNT2Q6UVM3 1135 aa15.07■□□□□ 0
USF1-205ENST00000473969 TAS1R3Q7RTX0 852 aa15.07■□□□□ 0
USF1-205ENST00000473969 KLHL23Q8NBE8 558 aa15.07■□□□□ 0
USF1-205ENST00000473969 PPM1EQ8WY54 764 aa15.07■□□□□ 0
USF1-205ENST00000473969 GAD1Q99259 594 aa15.07■□□□□ 0
USF1-205ENST00000473969 C7orf25Q9BPX7 421 aa15.07■□□□□ 0
USF1-205ENST00000473969 TRIM9Q9C026 710 aa15.07■□□□□ 0
USF1-205ENST00000473969 LMAN2LQ9H0V9 348 aa15.07■□□□□ 0
USF1-205ENST00000473969 RNF39Q9H2S5 420 aa15.07■□□□□ 0
USF1-205ENST00000473969 TBC1D13Q9NVG8 400 aa15.07■□□□□ 0
USF1-205ENST00000473969 SNTG2Q9NY99 539 aa15.07■□□□□ 0
USF1-205ENST00000473969 TBC1D7Q9P0N9 293 aa15.07■□□□□ 0
USF1-205ENST00000473969 ANKFY1Q9P2R3 1169 aa15.07■□□□□ 0
USF1-205ENST00000473969 GDAQ9Y2T3 454 aa15.07■□□□□ 0
USF1-205ENST00000473969 ARL5CA6NH57 179 aa15.06■□□□□ 0
USF1-205ENST00000473969 HNRNPDLO14979 420 aaKnown RBP15.06■□□□□ 0
USF1-205ENST00000473969 ALDH2P05091 517 aa15.06■□□□□ 0
USF1-205ENST00000473969 EDN1P05305 212 aa15.06■□□□□ 0
USF1-205ENST00000473969 POU3F3P20264 500 aaPredicted RBP15.06■□□□□ 0
USF1-205ENST00000473969 GTF2BQ00403 316 aa15.06■□□□□ 0
USF1-205ENST00000473969 BMS1Q14692 1282 aaKnown RBP15.06■□□□□ 0
USF1-205ENST00000473969 LRRC55Q6ZSA7 311 aa15.06■□□□□ 0
USF1-205ENST00000473969 ZNF720Q7Z2F6 126 aa15.06■□□□□ 0
USF1-205ENST00000473969 KCNN1Q92952 543 aa15.06■□□□□ 0
USF1-205ENST00000473969 HVCN1Q96D96 273 aa15.06■□□□□ 0
USF1-205ENST00000473969 MRPL38Q96DV4 380 aaKnown RBP15.06■□□□□ 0
USF1-205ENST00000473969 ACCSQ96QU6 501 aa15.06■□□□□ 0
USF1-205ENST00000473969 CDT1Q9H211 546 aa15.06■□□□□ 0
USF1-205ENST00000473969 ST6GALNAC4Q9H4F1 302 aa15.06■□□□□ 0
USF1-205ENST00000473969 ALG13Q9NP73 1137 aaKnown RBP15.06■□□□□ 0
USF1-205ENST00000473969 OLFML3Q9NRN5 406 aa15.06■□□□□ 0
USF1-205ENST00000473969 TOPORSQ9NS56 1045 aaPredicted RBP15.06■□□□□ 0
USF1-205ENST00000473969 SPG21Q9NZD8 308 aa15.06■□□□□ 0
USF1-205ENST00000473969 KLK14Q9P0G3 267 aa15.06■□□□□ 0
USF1-205ENST00000473969 PLAGL2Q9UPG8 496 aa15.06■□□□□ 0
USF1-205ENST00000473969 MTCH2Q9Y6C9 303 aa15.06■□□□□ 0
USF1-205ENST00000473969 FGF18O76093 207 aa15.05■□□□□ -0
USF1-205ENST00000473969 LINC00271P0C7V0 271 aa15.05■□□□□ -0
USF1-205ENST00000473969 GRM5P41594 1212 aa15.05■□□□□ -0
USF1-205ENST00000473969 SCNN1GP51170 649 aa15.05■□□□□ -0
USF1-205ENST00000473969 NDUFA8P51970 172 aa15.05■□□□□ -0
USF1-205ENST00000473969 BCAR1P56945 870 aa15.05■□□□□ -0
USF1-205ENST00000473969 UBE3AQ05086 875 aa15.05■□□□□ -0
USF1-205ENST00000473969 COASYQ13057 564 aa15.05■□□□□ -0
USF1-205ENST00000473969 NOLC1Q14978 699 aaKnown RBP eCLIP15.05■□□□□ -0
USF1-205ENST00000473969 SKIV2LQ15477 1246 aaKnown RBP15.05■□□□□ -0
USF1-205ENST00000473969 CCDC85BQ15834 202 aaPredicted RBP15.05■□□□□ -0
USF1-205ENST00000473969 KYAT1Q16773 422 aa15.05■□□□□ -0
USF1-205ENST00000473969 ZC2HC1CQ53FD0 456 aaPredicted RBP15.05■□□□□ -0
USF1-205ENST00000473969 SYCP3Q8IZU3 236 aa15.05■□□□□ -0
USF1-205ENST00000473969 MICAL1Q8TDZ2 1067 aa15.05■□□□□ -0
USF1-205ENST00000473969 PPP2R3CQ969Q6 453 aa15.05■□□□□ -0
USF1-205ENST00000473969 CCDC47Q96A33 483 aaKnown RBP15.05■□□□□ -0
USF1-205ENST00000473969 TMEM169Q96HH4 297 aa15.05■□□□□ -0
USF1-205ENST00000473969 ACAP3Q96P50 834 aa15.05■□□□□ -0
USF1-205ENST00000473969 TMEM175Q9BSA9 504 aa15.05■□□□□ -0
USF1-205ENST00000473969 BLZF1Q9H2G9 400 aa15.05■□□□□ -0
USF1-205ENST00000473969 NRDE2Q9H7Z3 1164 aa15.05■□□□□ -0
USF1-205ENST00000473969 PTPRHQ9HD43 1115 aa15.05■□□□□ -0
USF1-205ENST00000473969 HCSTQ9UBK5 93 aa15.05■□□□□ -0
USF1-205ENST00000473969 FAN1Q9Y2M0 1017 aa15.05■□□□□ -0
USF1-205ENST00000473969 ZMYM2Q9UBW7 1377 aa15.05■□□□□ -0
USF1-205ENST00000473969 FRMD3A2A2Y4 597 aa15.04■□□□□ -0
USF1-205ENST00000473969 GRM6O15303 877 aa15.04■□□□□ -0
USF1-205ENST00000473969 LPXNO60711 386 aa15.04■□□□□ -0
USF1-205ENST00000473969 RECQL4O94761 1208 aa15.04■□□□□ -0
USF1-205ENST00000473969 ITGB1P05556 798 aa15.04■□□□□ -0
USF1-205ENST00000473969 MYL1P05976 194 aa15.04■□□□□ -0
USF1-205ENST00000473969 THP07101 528 aa15.04■□□□□ -0
USF1-205ENST00000473969 PROZP22891 400 aa15.04■□□□□ -0
USF1-205ENST00000473969 OSTNP61366 133 aa15.04■□□□□ -0
USF1-205ENST00000473969 GRIK3Q13003 919 aa15.04■□□□□ -0
USF1-205ENST00000473969 TIGD5Q53EQ6 642 aa15.04■□□□□ -0
USF1-205ENST00000473969 SLFN12LQ6IEE8 588 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms