RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NAPGQ99747 312 aaPredicted RBP19.52■□□□□ 0.72
VARS2-206ENST00000473916 MSTO1Q9BUK6 570 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 HDAC6Q9UBN7 1215 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 PPME1Q9Y570 386 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 ZNF233A6NK53 670 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 FOXN3O00409 490 aaPredicted RBP19.52■□□□□ 0.72
VARS2-206ENST00000473916 MAP2K5Q13163 448 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 GRM1Q13255 1194 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 OR6J1Q8NGC5 347 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 TCP11Q8WWU5 503 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 KCNG1Q9UIX4 513 aa19.52■□□□□ 0.72
VARS2-206ENST00000473916 A0A0B4J269 797 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 P4HA2O15460 535 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 ATP1A1P05023 1023 aaKnown RBP19.51■□□□□ 0.71
VARS2-206ENST00000473916 MMP3P08254 477 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 KRT39Q6A163 491 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 SV2AQ7L0J3 742 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 ZBTB33Q86T24 672 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 SECISBP2LQ93073 1101 aaKnown RBP19.51■□□□□ 0.71
VARS2-206ENST00000473916 MINDY3Q9H8M7 445 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 TMEM8AQ9HCN3 771 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 PDE11AQ9HCR9 933 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 DNAH12Q6ZR08 3092 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 B4GALT5O43286 388 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 CSDE1O75534 798 aaKnown RBP19.51■□□□□ 0.71
VARS2-206ENST00000473916 CYP2B6P20813 491 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 KLRC1P26715 233 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 CTGFP29279 349 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 CYP2C19P33261 490 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 ABCD1P33897 745 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 CETN1Q12798 172 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 CRHR2Q13324 411 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 MXD4Q14582 209 aaPredicted RBP19.51■□□□□ 0.71
VARS2-206ENST00000473916 ERO1AQ96HE7 468 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 PI4K2AQ9BTU6 479 aa19.51■□□□□ 0.71
VARS2-206ENST00000473916 DDX3XO00571 662 aaKnown RBP eCLIP19.5■□□□□ 0.71
VARS2-206ENST00000473916 GAS2O43903 313 aaKnown RBP19.5■□□□□ 0.71
VARS2-206ENST00000473916 PRKCBP05771 671 aa19.5■□□□□ 0.71
VARS2-206ENST00000473916 TNFSF9P41273 254 aa19.5■□□□□ 0.71
VARS2-206ENST00000473916 SCARA3Q6AZY7 606 aa19.5■□□□□ 0.71
VARS2-206ENST00000473916 CDR2LQ86X02 465 aaPredicted RBP19.5■□□□□ 0.71
VARS2-206ENST00000473916 LNX1Q8TBB1 728 aaPredicted RBP19.5■□□□□ 0.71
VARS2-206ENST00000473916 KREMEN1Q96MU8 473 aa19.5■□□□□ 0.71
VARS2-206ENST00000473916 TSGA10Q9BZW7 698 aa19.5■□□□□ 0.71
VARS2-206ENST00000473916 H3BRB1 525 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 PMM2O15305 246 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 PJA2O43164 708 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 BUB1O43683 1085 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 IQCF3P0C7M6 154 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 FERP16591 822 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 AMPD2Q01433 879 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 OLFML2BQ68BL8 750 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 TUT1Q9H6E5 874 aaKnown RBP19.49■□□□□ 0.71
VARS2-206ENST00000473916 RBAKQ9NYW8 714 aaPredicted RBP19.49■□□□□ 0.71
VARS2-206ENST00000473916 TLL2Q9Y6L7 1015 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 FAM189A1O60320 539 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 EFNA5P52803 228 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 CHMP4BP1P59074 171 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 TNFAIP2Q03169 654 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 PSMD6Q15008 389 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 ELF2Q15723 593 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 PPM1KQ8N3J5 372 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 USP6NLQ92738 828 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 ACO2Q99798 780 aaKnown RBP19.49■□□□□ 0.71
VARS2-206ENST00000473916 NAGPAQ9UK23 515 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 ABT1Q9ULW3 272 aaKnown RBP19.49■□□□□ 0.71
VARS2-206ENST00000473916 NENFQ9UMX5 172 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 COQ4Q9Y3A0 265 aa19.49■□□□□ 0.71
VARS2-206ENST00000473916 BZW2Q9Y6E2 419 aaKnown RBP19.49■□□□□ 0.71
VARS2-206ENST00000473916 INO80B-WBP1J3KQ70 363 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 ABLIM1O14639 778 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 DYNC1LI2O43237 492 aaPredicted RBP19.48■□□□□ 0.71
VARS2-206ENST00000473916 PPFIA4O75335 1185 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 VTNP04004 478 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 ANK1P16157 1881 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 MAPK6Q16659 721 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 KIAA0753Q2KHM9 967 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 ERCC6LQ2NKX8 1250 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 ZNF484Q5JVG2 852 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 IQSEC1Q6DN90 963 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 SLFN12LQ6IEE8 588 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 PALB2Q86YC2 1186 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 GLYCTKQ8IVS8 523 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 ZBTB8OSQ8IWT0 167 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 LINC01465Q8N7H1 131 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 FBXL13Q8NEE6 735 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 SLC20A1Q8WUM9 679 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 TATDN2Q93075 761 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 SYT11Q9BT88 431 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 MRPL4Q9BYD3 311 aaKnown RBP19.48■□□□□ 0.71
VARS2-206ENST00000473916 INO80BQ9C086 356 aaPredicted RBP19.48■□□□□ 0.71
VARS2-206ENST00000473916 ZCCHC17Q9NP64 241 aaKnown RBP19.48■□□□□ 0.71
VARS2-206ENST00000473916 ACP6Q9NPH0 428 aa19.48■□□□□ 0.71
VARS2-206ENST00000473916 CLDN3O15551 220 aa19.47■□□□□ 0.71
VARS2-206ENST00000473916 SRGAP2O75044 1071 aa19.47■□□□□ 0.71
VARS2-206ENST00000473916 ZNF865P0CJ78 1059 aaPredicted RBP19.47■□□□□ 0.71
VARS2-206ENST00000473916 SCP2P22307 547 aa19.47■□□□□ 0.71
VARS2-206ENST00000473916 MBTD1Q05BQ5 628 aa19.47■□□□□ 0.71
VARS2-206ENST00000473916 TDRD10Q5VZ19 366 aaKnown RBP19.47■□□□□ 0.71
VARS2-206ENST00000473916 C15orf39Q6ZRI6 1047 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms