RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SLF1Q9BQI6 1058 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 HSD3B7Q9H2F3 369 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 GMIPQ9P107 970 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 PNPLA6Q8IY17 1366 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 SYNGAP1Q96PV0 1343 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 PTPRUQ92729 1446 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 AOC2O75106 756 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ALDH2P05091 517 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC3A2P08195 630 aaKnown RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 MYBL1P10243 752 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 PORP16435 677 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 CASP14P31944 242 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 GUCY2FP51841 1108 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 HSPA2P54652 639 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 GEMIN4P57678 1058 aaKnown RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 MCL1Q07820 350 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 RASGRF1Q13972 1273 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 PPP2R5EQ16537 467 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 HP1BP3Q5SSJ5 553 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 PAPD7Q5XG87 772 aaKnown RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF787Q6DD87 383 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 C3orf62Q6ZUJ4 267 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 IQCKQ8N0W5 287 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 SH2D3CQ8N5H7 860 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ZIM3Q96PE6 472 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 PPANQ9NQ55 473 aaKnown RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 HOXC10Q9NYD6 342 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 SAR1BQ9Y6B6 198 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC22A31A6NKX4 558 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 BTBD19C9JJ37 291 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 CETN3O15182 167 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 PDPK1O15530 556 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 HNRNPRO43390 633 aaKnown RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 DNAJA2O60884 412 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ZBED4O75132 1171 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 HOXB4P17483 251 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 GNAZP19086 355 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 FUT4P22083 530 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ALDH5A1P51649 535 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP8B2P98198 1209 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 EIF2B5Q13144 721 aaKnown RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 TBC1D10BQ4KMP7 808 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF772Q68DY9 489 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 NEPROQ6NW34 567 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 DTWD1Q8N5C7 304 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ZSCAN1Q8NBB4 408 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 GDAP1Q8TB36 358 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 TRPC4APQ8TEL6 797 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 DNAJC7Q99615 494 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 LSG1Q9H089 658 aaKnown RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ALDH8A1Q9H2A2 487 aaPredicted RBP5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 LRCH1Q9Y2L9 728 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 ABCC12Q96J65 1359 aa5.54□□□□□ -1.52
TMEM39A-206ENST00000473684 SART1O43290 800 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP2C2O75185 946 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 GJB6O95452 261 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 LDHAP00338 332 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ASLP04424 464 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ITGA2BP08514 1039 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ACRP10323 421 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CPA3P15088 417 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 PLCG1P19174 1290 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 HSPA1LP34931 641 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 DGKGP49619 791 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 MECOMQ03112 1051 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 GOLGA8FQ08AF8 430 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 GOLGA8DPQ0D2H9 430 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 BIRC3Q13489 604 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 P3H1Q32P28 736 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ADALQ6DHV7 355 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 LYPD4Q6UWN0 246 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CYP26C1Q6V0L0 522 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CPLX4Q7Z7G2 160 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 C12orf40Q86WS4 652 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 TTC30AQ86WT1 665 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 TTC39CQ8N584 583 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 HAUS1Q96CS2 278 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ATG4CQ96DT6 458 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CLIP3Q96DZ5 547 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 TUBGCP5Q96RT8 1024 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 MMS19Q96T76 1030 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 HNRNPABQ99729 332 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SPATA16Q9BXB7 569 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 NACAP1Q9BZK3 213 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 INIPQ9NRY2 104 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ADAM22Q9P0K1 906 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC12A6Q9UHW9 1150 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ADAM30Q9UKF2 790 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 PRELID1Q9Y255 219 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 MYH15Q9Y2K3 1946 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ARHGEF28Q8N1W1 1705 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ANKARQ7Z5J8 1434 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 AFF2P51816 1311 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 A0A087WWV3 80 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 A0A0J9YVX5 310 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 MAGEA13PA6NCF6 341 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms