RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 CEP290O15078 2479 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 KIAA1671Q9BY89 1806 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 BECN2A8MW95 431 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 IKBKBO14920 756 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 MGEA5O60502 916 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 NPTXRO95502 500 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 MCF2P10911 925 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 RPL13P26373 211 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 MCL1Q07820 350 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 MYBPC2Q14324 1141 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 DSC3Q14574 896 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 IQCB1Q15051 598 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 DCAF4L1Q3SXM0 396 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 GAS2L3Q86XJ1 694 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 SLC9A9Q8IVB4 645 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 XXYLT1Q8NBI6 393 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 DBF4BQ8NFT6 615 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 NOC3LQ8WTT2 800 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 DPF3Q92784 378 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 DMAC2Q9NW81 257 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 AGO2Q9UKV8 859 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-217ENST00000473348 GOLGA8IPA6NC78 632 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 GOLGA8JA6NMD2 632 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 SMTNL1A8MU46 457 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 KIAA0391O15091 583 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 CETN3O15182 167 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 OGTO15294 1046 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 EXOC3O60645 756 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 FGFR1OPO95684 399 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 CSF2RAP15509 400 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 ZSCAN20P17040 1043 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 ADAM9Q13443 819 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 NCAPHQ15003 741 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 UBXN11Q5T124 520 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 CEP135Q66GS9 1140 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 GPD1LQ8N335 351 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 CEP120Q8N960 986 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 ZSWIM2Q8NEG5 633 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 TMEM174Q8WUU8 243 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 LINC01599Q8WXQ3 324 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 APBB2Q92870 758 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 CEP63Q96MT8 703 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 ADAM2Q99965 735 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 SRRTQ9BXP5 876 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 EIF2AQ9BY44 585 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 TRIM6Q9C030 488 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 MKI67P46013 3256 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-217ENST00000473348 EXTL3O43909 919 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 FAM189A1O60320 539 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 SYN1P17600 705 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 CASP4P49662 377 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 ACOT2P49753 483 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 TCTN1Q2MV58 587 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 SEZ6Q53EL9 994 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 ZBTB41Q5SVQ8 909 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 CNKSR3Q6P9H4 555 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 CBWD2Q8IUF1 395 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 BADQ92934 168 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 VWCEQ96DN2 955 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 FAM213AQ9BRX8 229 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 RBSNQ9H1K0 784 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 THAP9Q9H5L6 903 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 FANCLQ9NW38 375 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 ZMYND8Q9ULU4 1186 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 FRMD4BQ9Y2L6 1034 aa13.68□□□□□ -0.22
TRAPPC12-217ENST00000473348 GOLGA6L19H0YKK7 550 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 SLC16A3O15427 465 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 AKAP3O75969 853 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 LDHAP00338 332 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 ADRB2P07550 413 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 PFKMP08237 780 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 EPB41P11171 864 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 TNFSF9P41273 254 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 GRM5P41594 1212 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 RAB27AP51159 221 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 OSTNP61366 133 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 TPM4P67936 248 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 FPGSQ05932 587 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 HSP90AA2PQ14568 343 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 SNRNP35Q16560 246 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 CCDC40Q4G0X9 1142 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 CDKAL1Q5VV42 579 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 FAM43BQ6ZT52 329 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 FAM114A1Q8IWE2 563 aa13.67□□□□□ -0.22
TRAPPC12-217ENST00000473348 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms