RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 C6orf118Q5T5N4 469 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 KIFC3Q9BVG8 833 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 RANBP17Q9H2T7 1088 aaKnown RBP22.69■■□□□ 1.22
COL18A1-207ENST00000473212 PODXLO00592 558 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 CYP26A1O43174 497 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 ADRB2P07550 413 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 HSPA6P17066 643 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 PEX5P50542 639 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 ADCY2Q08462 1091 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 SEL1L2Q5TEA6 688 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 CC2D2BQ6DHV5 1058 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 CEP57Q86XR8 500 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 ANKS4BQ8N8V4 417 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 ARHGEF10LQ9HCE6 1279 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 KCNH7Q9NS40 1196 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 CNOT7Q9UIV1 285 aaKnown RBP22.69■■□□□ 1.22
COL18A1-207ENST00000473212 ZHX2Q9Y6X8 837 aa22.69■■□□□ 1.22
COL18A1-207ENST00000473212 ENTPD3O75355 529 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 DNAJC8O75937 253 aaPredicted RBP22.68■■□□□ 1.22
COL18A1-207ENST00000473212 AGTP01019 485 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 MAP2K1Q02750 393 aaPredicted RBP22.68■■□□□ 1.22
COL18A1-207ENST00000473212 PREPLQ4J6C6 727 aaPredicted RBP22.68■■□□□ 1.22
COL18A1-207ENST00000473212 SEMA4DQ92854 862 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 KREMEN1Q96MU8 473 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 CCDC113Q9H0I3 377 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 CXorf56Q9H5V9 222 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 ASAP2O43150 1006 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 PPIP5K2O43314 1243 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 RFX1P22670 979 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 IFNAR2P48551 515 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 UGCGQ16739 394 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 EPC2Q52LR7 807 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 MIER3Q7Z3K6 550 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 PIGWQ7Z7B1 504 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 CCDC105Q8IYK2 499 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 ELAC2Q9BQ52 826 aaKnown RBP22.68■■□□□ 1.22
COL18A1-207ENST00000473212 TOPORSQ9NS56 1045 aaPredicted RBP22.68■■□□□ 1.22
COL18A1-207ENST00000473212 HSPBP1Q9NZL4 362 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 DBR1Q9UK59 544 aaKnown RBP22.68■■□□□ 1.22
COL18A1-207ENST00000473212 PFASO15067 1338 aa22.68■■□□□ 1.22
COL18A1-207ENST00000473212 SLC16A4O15374 487 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 RIPK2O43353 540 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 CCDC38Q502W7 563 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 SLC9A9Q8IVB4 645 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 EPS8L1Q8TE68 723 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 SAAL1Q96ER3 474 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 TMEM117Q9H0C3 514 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 PARP2Q9UGN5 583 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 NPM3O75607 178 aaKnown RBP22.67■■□□□ 1.22
COL18A1-207ENST00000473212 VIMP08670 466 aaKnown RBP22.67■■□□□ 1.22
COL18A1-207ENST00000473212 CCDC25Q86WR0 208 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 CBWD2Q8IUF1 395 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 PPM1KQ8N3J5 372 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 CCDC127Q96BQ5 260 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 RPS6KC1Q96S38 1066 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 MXRA8Q9BRK3 442 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 TMEM39BQ9GZU3 492 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 QTRT2Q9H974 415 aaKnown RBP22.67■■□□□ 1.22
COL18A1-207ENST00000473212 HOMER2Q9NSB8 354 aa22.67■■□□□ 1.22
COL18A1-207ENST00000473212 TRPC5Q9UL62 973 aaPredicted RBP22.67■■□□□ 1.22
COL18A1-207ENST00000473212 ALAS1P13196 640 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 PHLDB2Q86SQ0 1253 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 DHX38Q92620 1227 aaKnown RBP22.66■■□□□ 1.22
COL18A1-207ENST00000473212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.66■■□□□ 1.222e-7■■■■■ 31.9
COL18A1-207ENST00000473212 ZBTB12Q9Y330 459 aaPredicted RBP22.66■■□□□ 1.22
COL18A1-207ENST00000473212 RASGRF2O14827 1237 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 DHX15O43143 795 aaKnown RBP22.66■■□□□ 1.22
COL18A1-207ENST00000473212 RTN2O75298 545 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 GBP1P32455 592 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 COILP38432 576 aaPredicted RBP22.66■■□□□ 1.22
COL18A1-207ENST00000473212 RARRES1P49788 294 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 SOX10P56693 466 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 NBPF9Q3BBW0 867 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 KRT27Q7Z3Y8 459 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 CCDC50Q8IVM0 306 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 SAMD15Q9P1V8 674 aa22.66■■□□□ 1.22
COL18A1-207ENST00000473212 AUHQ13825 339 aaKnown RBP22.65■■□□□ 1.22
COL18A1-207ENST00000473212 WLSQ5T9L3 541 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 PLA2G4FQ68DD2 849 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 VEZTQ9HBM0 779 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 NOCTQ9UK39 431 aaKnown RBP22.65■■□□□ 1.22
COL18A1-207ENST00000473212 MRPL11Q9Y3B7 192 aaKnown RBP22.65■■□□□ 1.22
COL18A1-207ENST00000473212 FOXO6A8MYZ6 492 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 RAD17O75943 681 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 GGPS1O95749 300 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 RARGP13631 454 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 PEX3P56589 373 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 CETN1Q12798 172 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 ITIH4Q14624 930 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 TCEAL1Q15170 157 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 PPP1R7Q15435 360 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 HIBCHQ6NVY1 386 aaPredicted RBP22.65■■□□□ 1.22
COL18A1-207ENST00000473212 INTS8Q75QN2 995 aaKnown RBP22.65■■□□□ 1.22
COL18A1-207ENST00000473212 TAX1BP1Q86VP1 789 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 SLC13A5Q86YT5 568 aaPredicted RBP22.65■■□□□ 1.22
COL18A1-207ENST00000473212 CPXCR1Q8N123 301 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 ART4Q93070 314 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 WNT8AQ9H1J5 351 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 KCND2Q9NZV8 630 aa22.65■■□□□ 1.22
COL18A1-207ENST00000473212 RARAP10276 462 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms