RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 CFAP53Q96M91 514 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 PWWP2AQ96N64 755 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 CWC25Q9NXE8 425 aaPredicted RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 SUSD2Q9UGT4 822 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 SLC45A1Q9Y2W3 748 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 HCFC2Q9Y5Z7 792 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 ZHX2Q9Y6X8 837 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 MYO15AQ9UKN7 3530 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 MAST2Q6P0Q8 1798 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 A0A1W2PQJ5 194 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 GRXCR1A8MXD5 290 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 PPM1BO75688 479 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 GLI4P10075 376 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 PFKLP17858 780 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 CCL14Q16627 93 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 TREML2Q5T2D2 321 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 ZNF804AQ7Z570 1209 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 FAM9BQ8IZU0 186 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 LINC01356Q8N9X3 169 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 SEC16BQ96JE7 1060 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 FGD4Q96M96 766 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 PLEKHF1Q96S99 279 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 FANCLQ9NW38 375 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 AFG3L2Q9Y4W6 797 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 BACE2Q9Y5Z0 518 aa8.25□□□□□ -1.09
SCAF4-205ENST00000472318 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
SCAF4-205ENST00000472318 PLIN1O60240 522 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 TARBP2Q15633 366 aaKnown RBP8.24□□□□□ -1.09
SCAF4-205ENST00000472318 TRIM60Q495X7 471 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 MAP9Q49MG5 647 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 KRBA2Q6ZNG9 492 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 ADAT2Q7Z6V5 191 aaKnown RBP8.24□□□□□ -1.09
SCAF4-205ENST00000472318 ZNF513Q8N8E2 541 aaPredicted RBP8.24□□□□□ -1.09
SCAF4-205ENST00000472318 APPBP2Q92624 585 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 HOOK2Q96ED9 719 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 TRIM55Q9BYV6 548 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 RNF38Q9H0F5 515 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
SCAF4-205ENST00000472318 DBF4Q9UBU7 674 aaPredicted RBP8.24□□□□□ -1.09
SCAF4-205ENST00000472318 DCHS1Q96JQ0 3298 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 CCDC189A1A4V9 331 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 VAMP4O75379 141 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 GYS2P54840 703 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 AMPD2Q01433 879 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 HDAC1Q13547 482 aaPredicted RBP8.23□□□□□ -1.09
SCAF4-205ENST00000472318 VMACQ2NL98 169 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 APOBEC3HQ6NTF7 200 aaKnown RBP8.23□□□□□ -1.09
SCAF4-205ENST00000472318 SLC39A5Q6ZMH5 540 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 FAM169BQ8N8A8 192 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 ANKS1AQ92625 1134 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 MPHOSPH8Q99549 860 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 KRTAP4-2Q9BYR5 136 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 LUC7LQ9NQ29 371 aaKnown RBP8.23□□□□□ -1.09
SCAF4-205ENST00000472318 HYPKQ9NX55 129 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.23□□□□□ -1.09
SCAF4-205ENST00000472318 STRIP2Q9ULQ0 834 aa8.23□□□□□ -1.09
SCAF4-205ENST00000472318 RPAP1Q9BWH6 1393 aaPredicted RBP8.22□□□□□ -1.09
SCAF4-205ENST00000472318 DOCK3Q8IZD9 2030 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 C2orf71A6NGG8 1288 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 OTOL1A6NHN0 477 aaPredicted RBP8.22□□□□□ -1.09
SCAF4-205ENST00000472318 TRIM75PA6NK02 468 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 DNM1LO00429 736 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 ERC2O15083 957 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 IGKV5-2P06315 115 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 ZKSCAN1P17029 563 aaPredicted RBP8.22□□□□□ -1.09
SCAF4-205ENST00000472318 BUD31P41223 144 aaPredicted RBP8.22□□□□□ -1.09
SCAF4-205ENST00000472318 LIMS1P48059 325 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 SEPHS1P49903 392 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 PRR5P85299 388 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 PPP2R5EQ16537 467 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 AAK1Q2M2I8 961 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 DPY19L1Q2PZI1 675 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 WDR78Q5VTH9 848 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 FKBP1CQ5VVH2 108 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 TP53I13Q8NBR0 393 aaPredicted RBP8.22□□□□□ -1.09
SCAF4-205ENST00000472318 TDRD7Q8NHU6 1098 aaKnown RBP8.22□□□□□ -1.09
SCAF4-205ENST00000472318 USP6NLQ92738 828 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 UIMC1Q96RL1 719 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 BABAM1Q9NWV8 329 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 FBLN5Q9UBX5 448 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 AGTPBP1Q9UPW5 1226 aa8.22□□□□□ -1.09
SCAF4-205ENST00000472318 ANKRD34BA5PLL1 514 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 CAND2O75155 1236 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 GJC2Q5T442 439 aaPredicted RBP8.21□□□□□ -1.1
SCAF4-205ENST00000472318 VHLLQ6RSH7 139 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 HOMER1Q86YM7 354 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 SCYL3Q8IZE3 742 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 CPLX3Q8WVH0 158 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 FAM151AQ8WW52 585 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 LPAR1Q92633 364 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 TSPAN17Q96FV3 270 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 DEPDC7Q96QD5 511 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 SNTG2Q9NY99 539 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 APEX2Q9UBZ4 518 aa8.21□□□□□ -1.1
SCAF4-205ENST00000472318 DDX20Q9UHI6 824 aaKnown RBP8.21□□□□□ -1.1
SCAF4-205ENST00000472318 ZDBF2Q9HCK1 2354 aa8.2□□□□□ -1.1
SCAF4-205ENST00000472318 TRBV23OR9-2A0A075B6M9 112 aa8.2□□□□□ -1.1
SCAF4-205ENST00000472318 ZC3H12DA2A288 527 aaKnown RBP8.2□□□□□ -1.1
SCAF4-205ENST00000472318 FFAR3O14843 346 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms