RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 APOL6Q9BWW8 343 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 NRDE2Q9H7Z3 1164 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 UBE2ZQ9H832 354 aaPredicted RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 C17orf75Q9HAS0 396 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 UBN1Q9NPG3 1134 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 TLR9Q9NR96 1032 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 LZTS1Q9Y250 596 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 XIRP2A4UGR9 3374 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 ZMYM2Q9UBW7 1377 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 SPTBN5Q9NRC6 3674 aaKnown RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 B4GALT3O60512 393 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 MLH1P40692 756 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 AFF1P51825 1210 aaKnown RBP16.59■□□□□ 0.25
CALD1-215ENST00000472096 RNASELQ05823 741 aaKnown RBP16.59■□□□□ 0.25
CALD1-215ENST00000472096 PKP1Q13835 747 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 COL19A1Q14993 1142 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 TMEM132AQ24JP5 1023 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 GPBP1Q86WP2 473 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 KRI1Q8N9T8 703 aaKnown RBP16.59■□□□□ 0.25
CALD1-215ENST00000472096 ASB2Q96Q27 587 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 SPG21Q9NZD8 308 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 USP20Q9Y2K6 914 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 PCDHGC5Q9Y5F6 944 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 A0A0C4DFX4 3053 aa16.59■□□□□ 0.25
CALD1-215ENST00000472096 NPHP3-ACAD11A0A0J9YXS1 232 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 CARNS1A5YM72 827 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 SFI1A8K8P3 1242 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 FSCN2O14926 492 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 PLS3P13797 630 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 ALDH7A1P49419 539 aaKnown RBP16.58■□□□□ 0.24
CALD1-215ENST00000472096 HYAL1Q12794 435 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 MCM6Q14566 821 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 STK38Q15208 465 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 AAK1Q2M2I8 961 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 ARSHQ5FYA8 562 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 NT5DC1Q5TFE4 455 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 EEF1DP3Q658K8 133 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 TAS1R3Q7RTX0 852 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 ADGRD2Q7Z7M1 963 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 TMEM173Q86WV6 379 aaPredicted RBP16.58■□□□□ 0.24
CALD1-215ENST00000472096 ZNF280BQ86YH2 543 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 LINC00301Q8NCQ3 95 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 SPIRE2Q8WWL2 714 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 LARP4BQ92615 738 aaKnown RBP16.58■□□□□ 0.24
CALD1-215ENST00000472096 PABPC5Q96DU9 382 aaKnown RBP16.58■□□□□ 0.24
CALD1-215ENST00000472096 ZFP42Q96MM3 310 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
CALD1-215ENST00000472096 GAD1Q99259 594 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 REEP2Q9BRK0 252 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 ADPGKQ9BRR6 497 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 TMEM134Q9H6X4 195 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 KANSL3Q9P2N6 904 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 DNAJB4Q9UDY4 337 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 ODF2LQ9ULJ1 636 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 GIT1Q9Y2X7 761 aa16.58■□□□□ 0.24
CALD1-215ENST00000472096 VCANP13611 3396 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.57■□□□□ 0.24
CALD1-215ENST00000472096 GRXCR2A6NFK2 248 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 NT5C1B-RDH14C9J2C7 533 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 K7ERI5 159 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 SLC16A4O15374 487 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 DDHD2O94830 711 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 YEATS4O95619 227 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 POMCP01189 267 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 GALTP07902 379 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 AKAP5P24588 427 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 TXLNAP40222 546 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 SLC11A1P49279 550 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 SCNN1GP51170 649 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 KCNQ1P51787 676 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 ERVFC1P60507 584 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
CALD1-215ENST00000472096 PPP2R3CQ969Q6 453 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 TMEM169Q96HH4 297 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 COL25A1Q9BXS0 654 aaPredicted RBP16.57■□□□□ 0.24
CALD1-215ENST00000472096 STK17AQ9UEE5 414 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 CCDC39Q9UFE4 941 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
CALD1-215ENST00000472096 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
CALD1-215ENST00000472096 SPTLC2O15270 562 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 KCNA5P22460 613 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 GTF2F1P35269 517 aaKnown RBP eCLIP16.56■□□□□ 0.24
CALD1-215ENST00000472096 KRT17Q04695 432 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 DCAF4L1Q3SXM0 396 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 ATF7IP2Q5U623 682 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 PLPP4Q5VZY2 271 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 PDE12Q6L8Q7 609 aaKnown RBP16.56■□□□□ 0.24
CALD1-215ENST00000472096 TMEM161BQ8NDZ6 487 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 BCL7CQ8WUZ0 217 aaPredicted RBP16.56■□□□□ 0.24
CALD1-215ENST00000472096 IGSF21Q96ID5 467 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 FAM193BQ96PV7 902 aaPredicted RBP16.56■□□□□ 0.24
CALD1-215ENST00000472096 TCF25Q9BQ70 676 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 TMEM175Q9BSA9 504 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 NTPCRQ9BSD7 190 aaKnown RBP16.56■□□□□ 0.24
CALD1-215ENST00000472096 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
CALD1-215ENST00000472096 ENTPD7Q9NQZ7 604 aa16.56■□□□□ 0.24
CALD1-215ENST00000472096 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms