RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 GEMIN8Q9NWZ8 242 aaKnown RBP18.76■□□□□ 0.59
RRP1-202ENST00000471909 RNF14Q9UBS8 474 aa18.76■□□□□ 0.59
RRP1-202ENST00000471909 PTPRFP10586 1907 aa18.76■□□□□ 0.59
RRP1-202ENST00000471909 A0A0G2JLL6 359 aaPredicted RBP18.75■□□□□ 0.59
RRP1-202ENST00000471909 IFI16Q16666 785 aaKnown RBP18.75■□□□□ 0.59
RRP1-202ENST00000471909 PRRT2Q7Z6L0 340 aaPredicted RBP18.75■□□□□ 0.59
RRP1-202ENST00000471909 FBXL18Q96ME1 805 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 ZIM3Q96PE6 472 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 POP1Q99575 1024 aaKnown RBP18.75■□□□□ 0.59
RRP1-202ENST00000471909 SPON1Q9HCB6 807 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 ZNF302Q9NR11 478 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 SOWAHBA6NEL2 793 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 TMCO5BA8MYB1 307 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
RRP1-202ENST00000471909 MAP2K1Q02750 393 aaPredicted RBP18.75■□□□□ 0.59
RRP1-202ENST00000471909 GLE1Q53GS7 698 aaKnown RBP18.75■□□□□ 0.59
RRP1-202ENST00000471909 MOB2Q70IA6 237 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 NCAPG2Q86XI2 1143 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 PALB2Q86YC2 1186 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 POMGNT1Q8WZA1 660 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 KAT5Q92993 513 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 CEP89Q96ST8 783 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 R3HDMLQ9H3Y0 253 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 ARHGAP28Q9P2N2 729 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 USP20Q9Y2K6 914 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 PAPPA2Q9BXP8 1791 aa18.75■□□□□ 0.59
RRP1-202ENST00000471909 TULP1O00294 542 aaPredicted RBP18.74■□□□□ 0.59
RRP1-202ENST00000471909 HNRNPDLO14979 420 aaKnown RBP18.74■□□□□ 0.59
RRP1-202ENST00000471909 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
RRP1-202ENST00000471909 EDNRBP24530 442 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 USP8P40818 1118 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 PPATQ06203 517 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 SWT1Q5T5J6 900 aaKnown RBP18.74■□□□□ 0.59
RRP1-202ENST00000471909 IFT20Q8IY31 132 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 PROCA1Q8NCQ7 364 aaPredicted RBP18.74■□□□□ 0.59
RRP1-202ENST00000471909 SEMA4DQ92854 862 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■■■■ 45.5
RRP1-202ENST00000471909 ARID2Q68CP9 1835 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 EMC2Q15006 297 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 RPS6KA1Q15418 735 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
RRP1-202ENST00000471909 FBXW10Q5XX13 1052 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 IFT74Q96LB3 600 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 MFSD14AQ96MC6 490 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 PAGR1Q9BTK6 254 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 TAS2R14Q9NYV8 317 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 OTOFQ9HC10 1997 aa18.74■□□□□ 0.59
RRP1-202ENST00000471909 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
RRP1-202ENST00000471909 KIAA0754O94854 1291 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 KIF4AO95239 1232 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 OATP04181 439 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 TNFAIP3P21580 790 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 HNRNPH1P31943 449 aaKnown RBP18.73■□□□□ 0.59
RRP1-202ENST00000471909 POLGP54098 1239 aaPredicted RBP18.73■□□□□ 0.59
RRP1-202ENST00000471909 CFAP58Q5T655 872 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 KCTD16Q68DU8 428 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 SLFN11Q7Z7L1 901 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 SH2D3CQ8N5H7 860 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 SLC20A1Q8WUM9 679 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
RRP1-202ENST00000471909 TOPORSQ9NS56 1045 aaPredicted RBP18.73■□□□□ 0.59
RRP1-202ENST00000471909 A0A0G2JMZ2 1700 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 FAM170AA1A519 330 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 ATP1A2P50993 1020 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 PTPROQ16827 1216 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 KRT39Q6A163 491 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 ERO1BQ86YB8 467 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 TMEM143Q96AN5 459 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 AGPAT1Q99943 283 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 NCAPGQ9BPX3 1015 aa18.73■□□□□ 0.59
RRP1-202ENST00000471909 CNMDO75829 334 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 FARP2O94887 1054 aaPredicted RBP18.72■□□□□ 0.59
RRP1-202ENST00000471909 KRT14P02533 472 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 TMEM253P0C7T8 217 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 CYP24A1Q07973 514 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 SPATS2Q86XZ4 545 aaKnown RBP18.72■□□□□ 0.59
RRP1-202ENST00000471909 TMC2Q8TDI7 906 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 VTI1AQ96AJ9 217 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 KREMEN1Q96MU8 473 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 DHX33Q9H6R0 707 aaKnown RBP18.72■□□□□ 0.59
RRP1-202ENST00000471909 TMEM8AQ9HCN3 771 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 OSGEPQ9NPF4 335 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 SEPT11Q9NVA2 429 aaKnown RBP18.72■□□□□ 0.59
RRP1-202ENST00000471909 COQ4Q9Y3A0 265 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 GSTTP1A0A1W2PQM5 241 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 KCNK3O14649 394 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 ZEB2O60315 1214 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 ABCB4P21439 1286 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 GARTP22102 1010 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 PAK2Q13177 524 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 SLC35G2Q8TBE7 412 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 TAF4BQ92750 862 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 BICD1Q96G01 975 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 PCYT2Q99447 389 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 NCANO14594 1321 aa18.72■□□□□ 0.59
RRP1-202ENST00000471909 ZBTB48P10074 688 aaPredicted RBP18.71■□□□□ 0.59
RRP1-202ENST00000471909 MNAT1P51948 309 aa18.71■□□□□ 0.59
RRP1-202ENST00000471909 RNASE9P60153 205 aaKnown RBP18.71■□□□□ 0.59
RRP1-202ENST00000471909 KDM7AQ6ZMT4 941 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms