RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 EPS8L1Q8TE68 723 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ARHGEF26Q96DR7 871 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 KLRG1Q96E93 195 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ZIM3Q96PE6 472 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ARHGAP28Q9P2N2 729 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 RASAL2Q9UJF2 1139 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 NOCTQ9UK39 431 aaKnown RBP11.46□□□□□ -0.58
APLF-204ENST00000471727 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ALG6Q9Y672 507 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 MYH11P35749 1972 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 DOCK1Q14185 1865 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 GOLGA6L10A6NI86 522 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 HMGB1P1B2RPK0 211 aaPredicted RBP11.45□□□□□ -0.58
APLF-204ENST00000471727 TISP43B9A030 160 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 EXTL3O43909 919 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 ZNF862O60290 1169 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 PIGRP01833 764 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 FGGP02679 453 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 CYP1A2P05177 515 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 PDE6CP51160 858 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 DRG2P55039 364 aaKnown RBP11.45□□□□□ -0.58
APLF-204ENST00000471727 ERVK-9P63128 1117 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 CDR2Q01850 454 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
APLF-204ENST00000471727 STRN3Q13033 797 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 DGKZQ13574 1117 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 HLTFQ14527 1009 aaKnown RBP eCLIP11.45□□□□□ -0.58
APLF-204ENST00000471727 HELQQ8TDG4 1101 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 ZKSCAN4Q969J2 545 aaPredicted RBP11.45□□□□□ -0.58
APLF-204ENST00000471727 TRIM11Q96F44 468 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 RNPC3Q96LT9 517 aaKnown RBP11.45□□□□□ -0.58
APLF-204ENST00000471727 PLVAPQ9BX97 442 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 FAM129AQ9BZQ8 928 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 A1CFQ9NQ94 594 aaKnown RBP11.45□□□□□ -0.58
APLF-204ENST00000471727 BCS1LQ9Y276 419 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 STYXL1Q9Y6J8 313 aa11.45□□□□□ -0.58
APLF-204ENST00000471727 GOLGA8IPA6NC78 632 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 GOLGA8JA6NMD2 632 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 HNRNPDLO14979 420 aaKnown RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 SGPL1O95470 568 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 CTNNA2P26232 953 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 CHRNA3P32297 505 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 USP8P40818 1118 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 CLDN10P78369 228 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 MRPS25P82663 173 aaKnown RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 POU5F1Q01860 360 aaKnown RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 PRKCEQ02156 737 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 PRPF4BQ13523 1007 aaKnown RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 SEL1L2Q5TEA6 688 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 ANGEL2Q5VTE6 544 aaKnown RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 RUFY4Q6ZNE9 571 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 EXOC8Q8IYI6 725 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 RIN2Q8WYP3 895 aaPredicted RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 BICD1Q96G01 975 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 KREMEN1Q96MU8 473 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 AP1M1Q9BXS5 423 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 CAPS2Q9BXY5 557 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 GOLPH3Q9H4A6 298 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 TAS2R14Q9NYV8 317 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 SEPT9Q9UHD8 586 aaPredicted RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 AFG3L2Q9Y4W6 797 aa11.44□□□□□ -0.58
APLF-204ENST00000471727 MAFBQ9Y5Q3 323 aaPredicted RBP11.44□□□□□ -0.58
APLF-204ENST00000471727 TMEM150BA6NC51 233 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 SRRM3A6NNA2 597 aaPredicted RBP11.43□□□□□ -0.58
APLF-204ENST00000471727 PODXLO00592 558 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 CYP26A1O43174 497 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 PPFIA4O75335 1185 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 RGS20O76081 388 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 MYBL1P10243 752 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 CYP11B1P15538 503 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 CHRNB2P17787 502 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 RFC5P40937 340 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 NAMPTP43490 491 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 LIG4P49917 911 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 FMO1Q01740 532 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 PSMD6Q15008 389 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 WDR44Q5JSH3 913 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 ACAD10Q6JQN1 1059 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 SV2AQ7L0J3 742 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 NOP9Q86U38 636 aaKnown RBP11.43□□□□□ -0.58
APLF-204ENST00000471727 DNAAF5Q86Y56 855 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 ARFGAP2Q8N6H7 521 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 SLC20A1Q8WUM9 679 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 MAIP1Q8WWC4 291 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 BSNDQ8WZ55 320 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 CCDC127Q96BQ5 260 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 WNK4Q96J92 1243 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 FNBP1Q96RU3 617 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 MPHOSPH6Q99547 160 aaKnown RBP11.43□□□□□ -0.58
APLF-204ENST00000471727 HINFPQ9BQA5 517 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 ZSWIM1Q9BR11 485 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 NIFKQ9BYG3 293 aaKnown RBP11.43□□□□□ -0.58
APLF-204ENST00000471727 DDX47Q9H0S4 455 aaKnown RBP11.43□□□□□ -0.58
APLF-204ENST00000471727 POLR3FQ9H1D9 316 aaPredicted RBP11.43□□□□□ -0.58
APLF-204ENST00000471727 TMEM134Q9H6X4 195 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 XPNPEP1Q9NQW7 623 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 NRBP2Q9NSY0 501 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 PARP2Q9UGN5 583 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms