RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 AP3M2P53677 418 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 ACSF2Q96CM8 615 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 FAM84BQ96KN1 310 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 VCPKMTQ9H867 229 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 CLTCQ00610 1675 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 PBLDP30039 288 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 TCF7P36402 384 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 ETFBP38117 255 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 FKBP3Q00688 224 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 PTPN12Q05209 780 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 XKR3Q5GH77 459 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 RRM2BQ7LG56 351 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 GIPC2Q8TF65 315 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 GIMAP4Q9NUV9 329 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 CYP2C19P33261 490 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 INHBEP58166 350 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 ERAP2Q6P179 960 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 HHIPL2Q6UWX4 724 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 KDM4CQ9H3R0 1056 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 CAPN2P17655 700 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 BLVRAP53004 296 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 POU5F1BQ06416 359 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 ZNF177Q13360 481 aaPredicted RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 MAN2A1Q16706 1144 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 RGMBQ6NW40 437 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 TRIM59Q8IWR1 403 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 LRRC8CQ8TDW0 803 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 CCDC3Q9BQI4 270 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 OLFML3Q9NRN5 406 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 SUN2Q9UH99 717 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 NDOR1Q9UHB4 597 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 MID2Q9UJV3 735 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 SLC39A10Q9ULF5 831 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 POTEMA6NI47 508 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 EFCAB14O75071 495 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 HIP1RO75146 1068 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 TJP3O95049 919 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 TUBBP07437 444 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 TOMM20Q15388 145 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 PABPC5Q96DU9 382 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 XPO6Q96QU8 1125 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.1□□□□□ -0.95
CD47-204ENST00000471694 FAM129AQ9BZQ8 928 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 CACNA2D2Q9NY47 1150 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 SMIM24O75264 130 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 ASS1P00966 412 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 NR3C2P08235 984 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 GCKP35557 465 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 VAMP7P51809 220 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 COPB1P53618 953 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 ATF7IP2Q5U623 682 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 HEATR6Q6AI08 1181 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 ATPAF2Q8N5M1 289 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 SNX31Q8N9S9 440 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 CCDC51Q96ER9 411 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 DDX27Q96GQ7 796 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 GPR63Q9BZJ6 419 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 AIPL1Q9NZN9 384 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 PCDHGB4Q9UN71 923 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 MED14O60244 1454 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 CFLARO15519 480 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 RPLP2P05387 115 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 AKR1A1P14550 325 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 EHHADHQ08426 723 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 NR5A1Q13285 461 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 KIZQ2M2Z5 673 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 ZNF658Q5TYW1 1059 aaPredicted RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 CYP4F22Q6NT55 531 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 HERC6Q8IVU3 1022 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 OTUB1Q96FW1 271 aaPredicted RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 CDV3Q9UKY7 258 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 SLC30A1Q9Y6M5 507 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 PTPRMP28827 1452 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 CDK12Q9NYV4 1490 aaPredicted RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 MYMKA6NI61 221 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 EBAG9O00559 213 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 ECEL1O95672 775 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 RFC5P40937 340 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 NT5C2P49902 561 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 EMC2Q15006 297 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 BBS9Q3SYG4 887 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 FNDC3BQ53EP0 1204 aaKnown RBP9.1□□□□□ -0.95
CD47-204ENST00000471694 USP33Q8TEY7 942 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 FBXO32Q969P5 355 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 SENP7Q9BQF6 1050 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 ATXN3LQ9H3M9 355 aa9.1□□□□□ -0.95
CD47-204ENST00000471694 DARSP14868 501 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 PDCLQ13371 301 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 PPP4R3CPQ6ZMV5 832 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 SMYD4Q8IYR2 804 aaPredicted RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 RNPC3Q96LT9 517 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 MED15Q96RN5 788 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 MRPL46Q9H2W6 279 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 GINM1Q9NU53 330 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms