RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MGEA5O60502 916 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 EXOC3O60645 756 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 NPTXRO95502 500 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 ZNF18P17022 549 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 RPL13P26373 211 aaKnown RBP20.96■□□□□ 0.95
PSPC1-203ENST00000471658 UBXN11Q5T124 520 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 FILIP1Q7Z7B0 1213 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 XXYLT1Q8NBI6 393 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 CEP63Q96MT8 703 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 FAM213AQ9BRX8 229 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 THAP9Q9H5L6 903 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 SQORQ9Y6N5 450 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 N4BP3O15049 544 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 KIAA0355O15063 1070 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 AXLP30530 894 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 ACOT2P49753 483 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 MYBPC2Q14324 1141 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 NOLC1Q14978 699 aaKnown RBP eCLIP20.95■□□□□ 0.94
PSPC1-203ENST00000471658 TCTN1Q2MV58 587 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 NOTUMQ6P988 496 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 CRELD2Q6UXH1 353 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-203ENST00000471658 CBWD2Q8IUF1 395 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 TMEM192Q8IY95 271 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 THNSL1Q8IYQ7 743 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 USP38Q8NB14 1042 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 TMEM174Q8WUU8 243 aa20.95■□□□□ 0.94
PSPC1-203ENST00000471658 ALPK3Q96L96 1907 aa20.94■□□□□ 0.94
PSPC1-203ENST00000471658 FAM189A1O60320 539 aa20.94■□□□□ 0.94
PSPC1-203ENST00000471658 ADRB2P07550 413 aa20.94■□□□□ 0.94
PSPC1-203ENST00000471658 TNFSF9P41273 254 aa20.94■□□□□ 0.94
PSPC1-203ENST00000471658 OSTNP61366 133 aa20.94■□□□□ 0.94
PSPC1-203ENST00000471658 GSE1Q14687 1217 aa20.94■□□□□ 0.94
PSPC1-203ENST00000471658 SLC27A1Q6PCB7 646 aa20.94■□□□□ 0.94
PSPC1-203ENST00000471658 CNOT6LQ96LI5 555 aaKnown RBP20.94■□□□□ 0.94
PSPC1-203ENST00000471658 IFIH1Q9BYX4 1025 aaKnown RBP20.94■□□□□ 0.94
PSPC1-203ENST00000471658 FSD2A1L4K1 749 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 TIMP1P01033 207 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 DSC3Q14574 896 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 DEFB128Q7Z7B8 93 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 RTN4RL1Q86UN2 441 aaPredicted RBP20.93■□□□□ 0.94
PSPC1-203ENST00000471658 C7orf61Q8IZ16 206 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 GPD1LQ8N335 351 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 DBF4BQ8NFT6 615 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 VWCEQ96DN2 955 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 HES2Q9Y543 173 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 SCN5AQ14524 2016 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 GOLGA6L3A6NEY3 463 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 KCNJ18B7U540 433 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 TULP1O00294 542 aaPredicted RBP20.93■□□□□ 0.94
PSPC1-203ENST00000471658 OGTO15294 1046 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 AP5Z1O43299 807 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 EXTL3O43909 919 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 FGFR1OPO95684 399 aaKnown RBP20.93■□□□□ 0.94
PSPC1-203ENST00000471658 MCF2P10911 925 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 CDK11BP21127 795 aaKnown RBP20.93■□□□□ 0.94
PSPC1-203ENST00000471658 PSMC2P35998 433 aaKnown RBP20.93■□□□□ 0.94
PSPC1-203ENST00000471658 KCNJ12Q14500 433 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 CCDC40Q4G0X9 1142 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 PLEKHG4Q58EX7 1191 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 TCP11X2Q5H9J9 407 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 TWF2Q6IBS0 349 aaKnown RBP20.93■□□□□ 0.94
PSPC1-203ENST00000471658 FAM186BQ8IYM0 893 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 BORCS6Q96GS4 357 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 FBXL18Q96ME1 805 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 ADPGKQ9BRR6 497 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 FRMD4BQ9Y2L6 1034 aa20.93■□□□□ 0.94
PSPC1-203ENST00000471658 RAG1P15918 1043 aa20.92■□□□□ 0.94
PSPC1-203ENST00000471658 SNRNP35Q16560 246 aaKnown RBP20.92■□□□□ 0.94
PSPC1-203ENST00000471658 PLEKHO2Q8TD55 490 aa20.92■□□□□ 0.94
PSPC1-203ENST00000471658 ADAM2Q99965 735 aa20.92■□□□□ 0.94
PSPC1-203ENST00000471658 CHST12Q9NRB3 414 aa20.92■□□□□ 0.94
PSPC1-203ENST00000471658 SLC16A3O15427 465 aaKnown RBP20.91■□□□□ 0.94
PSPC1-203ENST00000471658 CXCL10P02778 98 aa20.91■□□□□ 0.94
PSPC1-203ENST00000471658 STAG3L1P0CL83 205 aa20.91■□□□□ 0.94
PSPC1-203ENST00000471658 ZSCAN20P17040 1043 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-203ENST00000471658 WNT7BP56706 349 aa20.91■□□□□ 0.94
PSPC1-203ENST00000471658 TPM4P67936 248 aa20.91■□□□□ 0.94
PSPC1-203ENST00000471658 LINC01599Q8WXQ3 324 aa20.91■□□□□ 0.94
PSPC1-203ENST00000471658 MAGEC2Q9UBF1 373 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-203ENST00000471658 CPSF3Q9UKF6 684 aaKnown RBP20.91■□□□□ 0.94
PSPC1-203ENST00000471658 MEFVO15553 781 aaPredicted RBP20.9■□□□□ 0.94
PSPC1-203ENST00000471658 LDHAP00338 332 aaKnown RBP20.9■□□□□ 0.94
PSPC1-203ENST00000471658 EPB41P11171 864 aaKnown RBP20.9■□□□□ 0.94
PSPC1-203ENST00000471658 IBSPP21815 317 aaPredicted RBP20.9■□□□□ 0.94
PSPC1-203ENST00000471658 KRT31Q15323 416 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 DCAF4L1Q3SXM0 396 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 SMG8Q8ND04 991 aaKnown RBP20.9■□□□□ 0.94
PSPC1-203ENST00000471658 CCDC51Q96ER9 411 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 MKNK1Q9BUB5 465 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 APOL6Q9BWW8 343 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 RNF39Q9H2S5 420 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 NXF3Q9H4D5 531 aaKnown RBP20.9■□□□□ 0.94
PSPC1-203ENST00000471658 SNTG2Q9NY99 539 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 TAB2Q9NYJ8 693 aa20.9■□□□□ 0.94
PSPC1-203ENST00000471658 ZNF233A6NK53 670 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 KIAA0391O15091 583 aaKnown RBP20.89■□□□□ 0.94
PSPC1-203ENST00000471658 CSF2RAP15509 400 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 MTIF2P46199 727 aaKnown RBP20.89■□□□□ 0.94
PSPC1-203ENST00000471658 PLCB2Q00722 1185 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 APTXQ7Z2E3 356 aaKnown RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms