RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 DEPDC5O75140 1603 aa13.77□□□□□ -0.2
PCCB-210ENST00000471595 MAP2P11137 1827 aaKnown RBP13.77□□□□□ -0.2
PCCB-210ENST00000471595 TAC1P20366 129 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 USP38Q8NB14 1042 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
PCCB-210ENST00000471595 SPDL1Q96EA4 605 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 ISCUQ9H1K1 167 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.21
PCCB-210ENST00000471595 PNMA3Q9UL41 463 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 ANGPTL3Q9Y5C1 460 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 FHOD1Q9Y613 1164 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 GOLGA8MH3BSY2 632 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 P4HA2O15460 535 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 KCNQ2O43526 872 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 LPXNO60711 386 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 ARFIP2P53365 341 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 CDKL3Q8IVW4 592 aaPredicted RBP13.77□□□□□ -0.21
PCCB-210ENST00000471595 RCOR2Q8IZ40 523 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 VPS39Q96JC1 886 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 CCT8L2Q96SF2 557 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 TTC1Q99614 292 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 PPCSQ9HAB8 311 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 KLC4Q9NSK0 619 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 SUCLA2Q9P2R7 463 aaPredicted RBP13.77□□□□□ -0.21
PCCB-210ENST00000471595 H2AFXP16104 143 aaPredicted RBP13.77□□□□□ -0.21
PCCB-210ENST00000471595 RPA1P27694 616 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 EFNA5P52803 228 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 CDK17Q00537 523 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 KYAT1Q16773 422 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 WDR93Q6P2C0 686 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 CATSPER4Q7RTX7 472 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
PCCB-210ENST00000471595 FOXP3Q9BZS1 431 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
PCCB-210ENST00000471595 TYW5A2RUC4 315 aaKnown RBP13.76□□□□□ -0.21
PCCB-210ENST00000471595 M0QYV0 167 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ASAP2O43150 1006 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCCB-210ENST00000471595 CENPKQ9BS16 269 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 HNRNPCL1O60812 293 aaKnown RBP13.76□□□□□ -0.21
PCCB-210ENST00000471595 FGFR4P22455 802 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 DUOXA2Q1HG44 320 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 SMG5Q9UPR3 1016 aaKnown RBP13.76□□□□□ -0.21
PCCB-210ENST00000471595 HEY1Q9Y5J3 304 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 SETSIPP0DME0 302 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 PPP4CP60510 307 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 CDR2Q01850 454 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 KIF22Q14807 665 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 STRIP1Q5VSL9 837 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 UPF3AQ9H1J1 476 aaKnown RBP13.76□□□□□ -0.21
PCCB-210ENST00000471595 ARL2BPQ9Y2Y0 163 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 RAD51CO43502 376 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ENTPD3O75355 529 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 NDUFB10O96000 172 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 MYBP10242 640 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 BEST2Q8NFU1 509 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 FAM129AQ9BZQ8 928 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ETNK1Q9HBU6 452 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 MLXIPLQ9NP71 852 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 KLHL8Q9P2G9 620 aaPredicted RBP13.76□□□□□ -0.21
PCCB-210ENST00000471595 ZHX2Q9Y6X8 837 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 PRLRP16471 622 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ZFXP17010 805 aaPredicted RBP13.76□□□□□ -0.21
PCCB-210ENST00000471595 ARSEP51690 589 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 KLHDC7AQ5VTJ3 777 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 SPATA21Q7Z572 469 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ATP6V1E2Q96A05 226 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 TRIM15Q9C019 465 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 MROH2AA6NES4 1674 aa13.76□□□□□ -0.21
PCCB-210ENST00000471595 ERVK-24P63145 666 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 LRRC14Q15048 493 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCCB-210ENST00000471595 PPM1NQ8N819 430 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 MAGED2Q9UNF1 606 aaPredicted RBP13.75□□□□□ -0.21
PCCB-210ENST00000471595 TRIM33Q9UPN9 1127 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 DGAT1O75907 488 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 RXRBP28702 533 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 KLK7P49862 253 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 ROPN1BQ9BZX4 212 aaPredicted RBP13.75□□□□□ -0.21
PCCB-210ENST00000471595 ROPN1Q9HAT0 212 aaPredicted RBP13.75□□□□□ -0.21
PCCB-210ENST00000471595 MRPL40Q9NQ50 206 aaKnown RBP13.75□□□□□ -0.21
PCCB-210ENST00000471595 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 TOB1P50616 345 aaPredicted RBP13.75□□□□□ -0.21
PCCB-210ENST00000471595 ABI1Q8IZP0 508 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 DCLK2Q8N568 766 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 PPP1R16BQ96T49 567 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 CDH16O75309 829 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 BCAR1P56945 870 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 HIF1AQ16665 826 aa13.75□□□□□ -0.21
PCCB-210ENST00000471595 KRT80Q6KB66 452 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms