RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TMEM173Q86WV6 379 aaPredicted RBP10.2□□□□□ -0.78
CPSF4-211ENST00000471455 HACE1Q8IYU2 909 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 CMASQ8NFW8 434 aaPredicted RBP10.2□□□□□ -0.78
CPSF4-211ENST00000471455 TCP11Q8WWU5 503 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 PSPC1Q8WXF1 523 aaKnown RBP10.2□□□□□ -0.78
CPSF4-211ENST00000471455 AUTS2Q8WXX7 1259 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 LPPQ93052 612 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 RSAD1Q9HA92 442 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 DUSP12Q9UNI6 340 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 FAN1Q9Y2M0 1017 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 COL4A3BPQ9Y5P4 624 aa10.2□□□□□ -0.78
CPSF4-211ENST00000471455 PLXNA3P51805 1871 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 DENND4AQ7Z401 1863 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 ERLIN2O94905 339 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 REC8O95072 547 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 DEXIO95424 95 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 SOD2P04179 222 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 ALDH2P05091 517 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 RPS6KB1P23443 525 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 HSPA4P34932 840 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 QARSP47897 775 aaKnown RBP10.19□□□□□ -0.78
CPSF4-211ENST00000471455 CLCN4P51793 760 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 SSRP1Q08945 709 aaKnown RBP10.19□□□□□ -0.78
CPSF4-211ENST00000471455 NTRK3Q16288 839 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 LETM2Q2VYF4 491 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 LONRF3Q496Y0 759 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 ASCL5Q7RTU5 278 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 ERMP1Q7Z2K6 904 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 CCDC105Q8IYK2 499 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 BLIDQ8IZY5 108 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 DAGLBQ8NCG7 672 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 KCNB2Q92953 911 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 NXPE3Q969Y0 559 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 CCDC51Q96ER9 411 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 FAM20AQ96MK3 541 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 KLHL5Q96PQ7 755 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 NAP1L4Q99733 375 aaKnown RBP10.19□□□□□ -0.78
CPSF4-211ENST00000471455 AGXT2Q9BYV1 514 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 RHOBTB2Q9BYZ6 727 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 FAM117AQ9C073 453 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 SEMA4AQ9H3S1 761 aa10.19□□□□□ -0.78
CPSF4-211ENST00000471455 DDX25Q9UHL0 483 aaKnown RBP10.19□□□□□ -0.78
CPSF4-211ENST00000471455 ADAMTS3O15072 1205 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 ASAP2O43150 1006 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 MARCH6O60337 910 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 TDP2O95551 362 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 GLUD1P00367 558 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 C1RP00736 705 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 SSBP05455 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
CPSF4-211ENST00000471455 CNPP09543 421 aaKnown RBP10.18□□□□□ -0.78
CPSF4-211ENST00000471455 CPA1P15085 419 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 GCFC2P16383 781 aaKnown RBP10.18□□□□□ -0.78
CPSF4-211ENST00000471455 XBP1P17861 261 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 GLUD2P49448 558 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 AK2P54819 239 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 CREMQ03060 361 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 CWF19L1Q69YN2 538 aaKnown RBP10.18□□□□□ -0.78
CPSF4-211ENST00000471455 B3GNT9Q6UX72 402 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 OTUD6AQ7L8S5 288 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 FRMD5Q7Z6J6 570 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 MRPL10Q7Z7H8 261 aaKnown RBP10.18□□□□□ -0.78
CPSF4-211ENST00000471455 SIX5Q8N196 739 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 ETNPPLQ8TBG4 499 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 HDAC7Q8WUI4 952 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 BCL7CQ8WUZ0 217 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-211ENST00000471455 CEP170P1Q96L14 293 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 MBOAT7Q96N66 472 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 CEP89Q96ST8 783 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 HERC2P3Q9BVR0 1158 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 SLKQ9H2G2 1235 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-211ENST00000471455 SMOC2Q9H3U7 446 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 KCNK12Q9HB15 430 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 MAN1C1Q9NR34 630 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 DNAJB4Q9UDY4 337 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 SNX14Q9Y5W7 946 aa10.18□□□□□ -0.78
CPSF4-211ENST00000471455 CLUHO75153 1309 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 CCDC194A0A1B0GVG4 234 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 TMEM150BA6NC51 233 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 CFAP99D6REC4 459 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 CDKL5O76039 1030 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 STBD1O95210 358 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 P4HBP07237 508 aaKnown RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 SRGAP2CP0DJJ0 459 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 ITGA4P13612 1032 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 NCLP19338 710 aaKnown RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 PDIA3P30101 505 aaKnown RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 AXLP30530 894 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 GBP2P32456 591 aaPredicted RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 RPIAP49247 311 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 EVCP57679 992 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 CCT2P78371 535 aaKnown RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 PPP2R5CQ13362 524 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 TFDP1Q14186 410 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 ANGPT1Q15389 498 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 QPCTQ16769 361 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 PLA2G4FQ68DD2 849 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 NOTUMQ6P988 496 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 ZC3H14Q6PJT7 736 aaKnown RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 AGMOQ6ZNB7 445 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms