RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 ACKR2O00590 384 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 ARHGAP33O14559 1287 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 N4BP3O15049 544 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 OFD1O75665 1012 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 NPTXRO95502 500 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 BRD1O95696 1058 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 EDN1P05305 212 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 ITGB1P05556 798 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 ITGA4P13612 1032 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 PLS3P13797 630 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 LIG1P18858 919 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 PPM1AP35813 382 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 UBE3AQ05086 875 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 RAD51AP2Q09MP3 1159 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 MCM6Q14566 821 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 CCDC85BQ15834 202 aaPredicted RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 LONRF3Q496Y0 759 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 NOMO2Q5JPE7 1267 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 SLC27A1Q6PCB7 646 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 CCDC73Q6ZRK6 1079 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 LRRC55Q6ZSA7 311 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 CDR2LQ86X02 465 aaPredicted RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 KLHL23Q8NBE8 558 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 SMG8Q8ND04 991 aaKnown RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 URGCPQ8TCY9 931 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 KCNG4Q8TDN1 519 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 LARP4BQ92615 738 aaKnown RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 REEP2Q9BRK0 252 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 REPIN1Q9BWE0 567 aaKnown RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 NXF3Q9H4D5 531 aaKnown RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 PDZD7Q9H5P4 517 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 NSUN3Q9H649 340 aaKnown RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 UBN1Q9NPG3 1134 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 KMT5AQ9NQR1 393 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 TBC1D13Q9NVG8 400 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 THEGQ9P2T0 379 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 TFIP11Q9UBB9 837 aaKnown RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 KCNG1Q9UIX4 513 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 ODF2LQ9ULJ1 636 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 PLAGL2Q9UPG8 496 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 INPP5FQ9Y2H2 1132 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 RBM19Q9Y4C8 960 aaKnown RBP8.44□□□□□ -1.06
TRIM59-204ENST00000471396 HES2Q9Y543 173 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 PLXNA4Q9HCM2 1894 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 PRUNE2Q8WUY3 3088 aa8.44□□□□□ -1.06
TRIM59-204ENST00000471396 NPHP3-ACAD11A0A0J9YXS1 232 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 CARNS1A5YM72 827 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 SFI1A8K8P3 1242 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 K7ERI5 159 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 INPPL1O15357 1258 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 SLC16A4O15374 487 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 CUTAO60888 179 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 TBCAO75347 108 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 FGF18O76093 207 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 FAM13AO94988 1023 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 MLH1P40692 756 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 STAT6P42226 847 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 ZNF131P52739 623 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 DNM1Q05193 864 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 RNASELQ05823 741 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 DHX8Q14562 1220 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 DCAF4L1Q3SXM0 396 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 ARSHQ5FYA8 562 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 ATF7IP2Q5U623 682 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 RRAGBQ5VZM2 374 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 EEF1DP3Q658K8 133 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 KCNT2Q6UVM3 1135 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 APBB1IPQ7Z5R6 666 aaPredicted RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 THNSL1Q8IYQ7 743 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 SLC39A11Q8N1S5 342 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 SPPL3Q8TCT6 385 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 KCNN1Q92952 543 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 ADPGKQ9BRR6 497 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 NTPCRQ9BSD7 190 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 APOL6Q9BWW8 343 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 MRPL4Q9BYD3 311 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 TMEM134Q9H6X4 195 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 PARVGQ9HBI0 331 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 ALG13Q9NP73 1137 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 LARSQ9P2J5 1176 aaKnown RBP8.43□□□□□ -1.06
TRIM59-204ENST00000471396 CFAP45Q9UL16 551 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 GIT1Q9Y2X7 761 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 EYSQ5T1H1 3165 aa8.43□□□□□ -1.06
TRIM59-204ENST00000471396 TDRD15B5MCY1 1934 aaKnown RBP8.42□□□□□ -1.06
TRIM59-204ENST00000471396 H0YCG3 227 aa8.42□□□□□ -1.06
TRIM59-204ENST00000471396 ZC3H11AO75152 810 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRIM59-204ENST00000471396 CSPG5O95196 566 aa8.42□□□□□ -1.06
TRIM59-204ENST00000471396 MAPTP10636 758 aaKnown RBP8.42□□□□□ -1.06
TRIM59-204ENST00000471396 SCP2P22307 547 aa8.42□□□□□ -1.06
TRIM59-204ENST00000471396 DNAJB1P25685 340 aa8.42□□□□□ -1.06
TRIM59-204ENST00000471396 DDIT3P35638 169 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms