RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MDM1Q8TC05 714 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 EXTL1Q92935 676 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 FAXDC2Q96IV6 333 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 SLC2A13Q96QE2 648 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 UHRF1Q96T88 793 aaPredicted RBP5.31□□□□□ -1.56
BRCA2-202ENST00000470094 PDCD2LQ9BRP1 358 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 BCO1Q9HAY6 547 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 TRPS1Q9UHF7 1281 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 DNM3Q9UQ16 869 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 MRFAP1Q9Y605 127 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 WASHC2CQ9Y4E1 1318 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 GOLGA6L6A8MZA4 724 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 GABRDO14764 452 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
BRCA2-202ENST00000470094 RBP3P10745 1247 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 HSP90B1P14625 803 aaKnown RBP5.3□□□□□ -1.56
BRCA2-202ENST00000470094 GSPT1P15170 499 aaKnown RBP5.3□□□□□ -1.56
BRCA2-202ENST00000470094 PTPN7P35236 360 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 MCAMP43121 646 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 SCNN1GP51170 649 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 ANAPC15P60006 121 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 NOMO1Q15155 1222 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 DCAF17Q5H9S7 520 aaPredicted RBP5.3□□□□□ -1.56
BRCA2-202ENST00000470094 DOK3Q7L591 496 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 OR7D4Q8NG98 312 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 PGBD4Q96DM1 585 aa5.3□□□□□ -1.56
BRCA2-202ENST00000470094 FUBP3Q96I24 572 aaKnown RBP eCLIP5.3□□□□□ -1.56
BRCA2-202ENST00000470094 SMAD5Q99717 465 aaKnown RBP5.3□□□□□ -1.56
BRCA2-202ENST00000470094 ZMYM3Q14202 1370 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 KLHL33A6NCF5 533 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 FAM171A2A8MVW0 826 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 PRR5-ARHGAP8B1AHC4 643 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 B5MCH6 92 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 MATN3O15232 486 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 ADCY6O43306 1168 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 ENDOD1O94919 500 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 HK1P19367 917 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 RABGGTBP53611 331 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 PPP3CAQ08209 521 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 MGAT2Q10469 447 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 METTL24Q5JXM2 366 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 PRAMEF14Q5SWL7 426 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 Q6ZVL8 140 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 GGNQ86UU5 652 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 PNMA8AQ86V59 439 aaPredicted RBP5.29□□□□□ -1.56
BRCA2-202ENST00000470094 TMPRSS6Q8IU80 811 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 PQLC1Q8N2U9 271 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 PPM1NQ8N819 430 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 IL17DQ8TAD2 202 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 JADE3Q92613 823 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 MNTQ99583 582 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 SAP30BPQ9UHR5 308 aaKnown RBP5.29□□□□□ -1.56
BRCA2-202ENST00000470094 CLCA2Q9UQC9 943 aa5.29□□□□□ -1.56
BRCA2-202ENST00000470094 KLRG2A4D1S0 409 aaPredicted RBP5.28□□□□□ -1.56
BRCA2-202ENST00000470094 NDUFS2O75306 463 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 TNFRSF1AP19438 455 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 FLT3LGP49771 235 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 IGBP1P78318 339 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 KRT85P78386 507 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 PTPN21Q16825 1174 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 XYLT1Q86Y38 959 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 TRMT2AQ8IZ69 625 aaKnown RBP5.28□□□□□ -1.56
BRCA2-202ENST00000470094 REPS2Q8NFH8 660 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 OR52N2Q8NGI0 321 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 HOXB13Q92826 284 aaPredicted RBP5.28□□□□□ -1.56
BRCA2-202ENST00000470094 PLEKHG4BQ96PX9 1271 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 LSM14BQ9BX40 385 aaKnown RBP5.28□□□□□ -1.56
BRCA2-202ENST00000470094 ASPSCR1Q9BZE9 553 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 CSRNP2Q9H175 543 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 VPS11Q9H270 941 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 LANCL2Q9NS86 450 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 PARPBPQ9NWS1 579 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 SPEF1Q9Y4P9 236 aa5.28□□□□□ -1.56
BRCA2-202ENST00000470094 PLSCR1O15162 318 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 AMHP03971 560 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 CCND1P24385 295 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 SREBF1P36956 1147 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 SLC16A1P53985 500 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 PTH1RQ03431 593 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 FOXE3Q13461 319 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 PCBP2Q15366 365 aaKnown RBP eCLIP5.27□□□□□ -1.57
BRCA2-202ENST00000470094 VPS72Q15906 364 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 BRDTQ58F21 947 aaPredicted RBP5.27□□□□□ -1.57
BRCA2-202ENST00000470094 FAM47AQ5JRC9 791 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 MFSD14BQ5SR56 506 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 C1QL3Q5VWW1 255 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 NAIF1Q69YI7 327 aaPredicted RBP5.27□□□□□ -1.57
BRCA2-202ENST00000470094 HTR3DQ70Z44 454 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 ZNF572Q7Z3I7 529 aaPredicted RBP5.27□□□□□ -1.57
BRCA2-202ENST00000470094 RPUSD2Q8IZ73 545 aaKnown RBP5.27□□□□□ -1.57
BRCA2-202ENST00000470094 CEP95Q96GE4 821 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 C7orf25Q9BPX7 421 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 CPEB1Q9BZB8 566 aaKnown RBP5.27□□□□□ -1.57
BRCA2-202ENST00000470094 SLC13A1Q9BZW2 595 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 SENP6Q9GZR1 1112 aaPredicted RBP5.27□□□□□ -1.57
BRCA2-202ENST00000470094 SPON1Q9HCB6 807 aa5.27□□□□□ -1.57
BRCA2-202ENST00000470094 TNKSO95271 1327 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 XDHP47989 1333 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 FZD9O00144 591 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms