RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 HNRNPA1P09651 372 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC6-217ENST00000469223 HOXC13P31276 330 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 PDE1AP54750 535 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 GRM2Q14416 872 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 PPM1LQ5SGD2 360 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 CATSPER4Q7RTX7 472 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 CATIPQ7Z7H3 387 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 RILPL2Q969X0 211 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 FAM167AQ96KS9 214 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC6-217ENST00000469223 CHST7Q9NS84 486 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 FNIP2Q9P278 1114 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 GABBR1Q9UBS5 961 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 A0A087WZ62 844 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 ERICH2A1L162 156 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 MEIS1O00470 390 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 DHX15O43143 795 aaKnown RBP14.21□□□□□ -0.13
HDAC6-217ENST00000469223 XYLBO75191 536 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 PRKCEQ02156 737 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 HDAC1Q13547 482 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-217ENST00000469223 PABPC1LQ4VXU2 614 aaKnown RBP14.21□□□□□ -0.13
HDAC6-217ENST00000469223 SH3PXD2AQ5TCZ1 1133 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 CWC27Q6UX04 472 aaKnown RBP14.21□□□□□ -0.13
HDAC6-217ENST00000469223 PDZD3Q86UT5 571 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 TICAM2Q86XR7 235 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 COLGALT2Q8IYK4 626 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.13
HDAC6-217ENST00000469223 SPEM1Q8N4L4 309 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 FAM3CQ92520 227 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 FDXACB1Q9BRP7 624 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-217ENST00000469223 EDEM2Q9BV94 578 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 BRD9Q9H8M2 597 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 TCEAL9Q9UHQ7 104 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 PIAS3Q9Y6X2 628 aa14.21□□□□□ -0.13
HDAC6-217ENST00000469223 ATG2BQ96BY7 2078 aa14.21□□□□□ -0.14
HDAC6-217ENST00000469223 OATP04181 439 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 MPLP40238 635 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 CREMQ03060 361 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 PLA2G2CQ5R387 149 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 ANKRD45Q5TZF3 282 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 TANGO2Q6ICL3 276 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 C19orf48Q6RUI8 117 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 PRSS55Q6UWB4 352 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-217ENST00000469223 Q6ZS52 159 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-217ENST00000469223 MCRS1Q96EZ8 462 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 ANO3Q9BYT9 981 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 GPR62Q9BZJ7 368 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 C2orf42Q9NWW7 574 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 KANSL3Q9P2N6 904 aa14.2□□□□□ -0.14
HDAC6-217ENST00000469223 CYSRT1A8MQ03 144 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 IPO5O00410 1097 aaKnown RBP14.19□□□□□ -0.14
HDAC6-217ENST00000469223 PAPSS2O95340 614 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-217ENST00000469223 PSAPP07602 524 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 CHRNB1P11230 501 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 SDSP20132 328 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 HOXA9P31269 272 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 USP41Q3LFD5 358 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 FUT10Q6P4F1 479 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 KBTBD6Q86V97 674 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 WDR5BQ86VZ2 330 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 SLC7A14Q8TBB6 771 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 LOXL4Q96JB6 756 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 RBM12Q9NTZ6 932 aaKnown RBP14.19□□□□□ -0.14
HDAC6-217ENST00000469223 AGPAT5Q9NUQ2 364 aa14.19□□□□□ -0.14
HDAC6-217ENST00000469223 MRPS23Q9Y3D9 190 aaKnown RBP14.19□□□□□ -0.14
HDAC6-217ENST00000469223 PCNX2A6NKB5 2137 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 SPTA1P02549 2419 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 C4orf47A7E2U8 309 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 ZNF862O60290 1169 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 CEBPBP17676 345 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 FCARP24071 287 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 ZNF76P36508 570 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 DSC1Q08554 894 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 TRDNQ13061 729 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 PTGDRQ13258 359 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 SART3Q15020 963 aaKnown RBP14.18□□□□□ -0.14
HDAC6-217ENST00000469223 SLC5A9Q2M3M2 681 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 RTP2Q5QGT7 225 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 ZNF746Q6NUN9 644 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-217ENST00000469223 MRPL10Q7Z7H8 261 aaKnown RBP14.18□□□□□ -0.14
HDAC6-217ENST00000469223 PLA2G4DQ86XP0 818 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 ZNF654Q8IZM8 581 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 SRBD1Q8N5C6 995 aaKnown RBP14.18□□□□□ -0.14
HDAC6-217ENST00000469223 ELSPBP1Q96BH3 223 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 BBC3Q96PG8 261 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-217ENST00000469223 KCNH3Q9ULD8 1083 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 GPSM3Q9Y4H4 160 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 ASXL3Q9C0F0 2248 aa14.18□□□□□ -0.14
HDAC6-217ENST00000469223 FAM86B1E9PN63 330 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 HYAL3O43820 417 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-217ENST00000469223 FAM86B2P0C5J1 330 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 SREBF1P36956 1147 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 MLH1P40692 756 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 RAP1GAPP47736 663 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 SCNN1GP51170 649 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 UGCGQ16739 394 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 POTEHQ6S545 545 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms