RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 SFI1A8K8P3 1242 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 FSCN2O14926 492 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 SLC16A4O15374 487 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 LINC01565O15544 149 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 DDHD2O94830 711 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 MATR3P43243 847 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 YARSP54577 528 aaKnown RBP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 GRIN1Q05586 938 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 GRIK3Q13003 919 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 ADAM15Q13444 863 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 GIT2Q14161 759 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 DUSP6Q16828 381 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 ZNF568Q3ZCX4 644 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 DDX53Q86TM3 631 aaKnown RBP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 LARP4BQ92615 738 aaKnown RBP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 BICD1Q96G01 975 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 TMEM134Q9H6X4 195 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 SNTG2Q9NY99 539 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 ODF2LQ9ULJ1 636 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 ZMYM2Q9UBW7 1377 aa14.29□□□□□ -0.12
CLRN1-204ENST00000468836 FNDC1Q4ZHG4 1894 aaPredicted RBP14.29□□□□□ -0.12
CLRN1-204ENST00000468836 NRP1O14786 923 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 TBX10O75333 385 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 CXCL14O95715 111 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 HARSP12081 509 aaKnown RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 SSTR3P32745 418 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 AFF1P51825 1210 aaKnown RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 MCM6Q14566 821 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 COL19A1Q14993 1142 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 PTPAQ15257 358 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 CTC1Q2NKJ3 1217 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 SPECC1Q5M775 1068 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 TMEM173Q86WV6 379 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 DAW1Q8N136 415 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 KRI1Q8N9T8 703 aaKnown RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 SPIRE2Q8WWL2 714 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 RAD54LQ92698 747 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 NECAB3Q96P71 396 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 USP28Q96RU2 1077 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 CCDC94Q9BW85 323 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 COLEC11Q9BWP8 271 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 KIAA1671Q9BY89 1806 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 CCSER1Q9C0I3 900 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 TOPORSQ9NS56 1045 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 ARHGAP28Q9P2N2 729 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 FBXO2Q9UK22 296 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 BARX2Q9UMQ3 279 aaPredicted RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 TNFSF13BQ9Y275 285 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 USP20Q9Y2K6 914 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
CLRN1-204ENST00000468836 SPTBN5Q9NRC6 3674 aaKnown RBP14.28□□□□□ -0.12
CLRN1-204ENST00000468836 NPHP3-ACAD11A0A0J9YXS1 232 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 GRXCR2A6NFK2 248 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 HIDE1A8MVS5 230 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 K7ENM7 598 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 INPPL1O15357 1258 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 RECQL4O94761 1208 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 URODP06132 367 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 CTSAP10619 480 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 IL9P15248 144 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 MAPK7Q13164 816 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 SMAD4Q13485 552 aaKnown RBP14.27□□□□□ -0.13
CLRN1-204ENST00000468836 NT5DC1Q5TFE4 455 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 EEF1DP3Q658K8 133 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 KIAA1841Q6NSI8 718 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 ZBTB33Q86T24 672 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 MYCT1Q8N699 235 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 MRPL43Q8N983 215 aaKnown RBP14.27□□□□□ -0.13
CLRN1-204ENST00000468836 EPSTI1Q96J88 318 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 REEP2Q9BRK0 252 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 EMILIN2Q9BXX0 1053 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 ZBP1Q9H171 429 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 PARVGQ9HBI0 331 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 ANKFY1Q9P2R3 1169 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 STK17AQ9UEE5 414 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 SSX2IPQ9Y2D8 614 aa14.27□□□□□ -0.13
CLRN1-204ENST00000468836 PRUNE2Q8WUY3 3088 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 C2orf71A6NGG8 1288 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 THP07101 528 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 ZSCAN22P10073 491 aaPredicted RBP14.26□□□□□ -0.13
CLRN1-204ENST00000468836 LTBRP36941 435 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 STAT6P42226 847 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 DLX2Q07687 328 aaPredicted RBP14.26□□□□□ -0.13
CLRN1-204ENST00000468836 SLC39A14Q15043 492 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 FOXD4L6Q3SYB3 417 aaPredicted RBP14.26□□□□□ -0.13
CLRN1-204ENST00000468836 FOXD4L3Q6VB84 417 aaPredicted RBP14.26□□□□□ -0.13
CLRN1-204ENST00000468836 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 COLGALT2Q8IYK4 626 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 BCL7CQ8WUZ0 217 aaPredicted RBP14.26□□□□□ -0.13
CLRN1-204ENST00000468836 AUTS2Q8WXX7 1259 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 CASP10Q92851 521 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 CLIC6Q96NY7 704 aa14.26□□□□□ -0.13
CLRN1-204ENST00000468836 POP1Q99575 1024 aaKnown RBP14.26□□□□□ -0.13
CLRN1-204ENST00000468836 ACO2Q99798 780 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms