RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 CSF2RAP15509 400 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 ZSCAN20P17040 1043 aaPredicted RBP12.32□□□□□ -0.44
MSH5-214ENST00000468602 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
MSH5-214ENST00000468602 GRM5P41594 1212 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 LIG4P49917 911 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 CCL23P55773 120 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 FPGSQ05932 587 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 NOLC1Q14978 699 aaKnown RBP eCLIP12.32□□□□□ -0.44
MSH5-214ENST00000468602 PSRC1Q6PGN9 363 aaPredicted RBP12.32□□□□□ -0.44
MSH5-214ENST00000468602 LRRC55Q6ZSA7 311 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 C16orf59Q7L2K0 433 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 SMYD4Q8IYR2 804 aaPredicted RBP12.32□□□□□ -0.44
MSH5-214ENST00000468602 C7orf61Q8IZ16 206 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 SCLYQ96I15 445 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 HAPLN2Q9GZV7 340 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 NAT10Q9H0A0 1025 aaKnown RBP12.32□□□□□ -0.44
MSH5-214ENST00000468602 CDT1Q9H211 546 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 UBN1Q9NPG3 1134 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
MSH5-214ENST00000468602 COL6A3P12111 3177 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 OGTO15294 1046 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 SLC16A3O15427 465 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 MGEA5O60502 916 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 CLTAP09496 248 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 BMP8BP34820 402 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 CLDN10P78369 228 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 IKBKEQ14164 716 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 ALKAL1Q6UXT8 129 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 FILIP1Q7Z7B0 1213 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 CD302Q8IX05 232 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 SYCP3Q8IZU3 236 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 SMG8Q8ND04 991 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 NOC3LQ8WTT2 800 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 NELFBQ8WX92 580 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 LINC01599Q8WXQ3 324 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 HERVK_113Q902F9 699 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 BORCS6Q96GS4 357 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 ZNF668Q96K58 619 aaPredicted RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 DUSP9Q99956 384 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 GDF15Q99988 308 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 PLEKHA5Q9HAU0 1116 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 PRDM5Q9NQX1 630 aaPredicted RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 FAM105AQ9NUU6 356 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 CPSF3Q9UKF6 684 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 PIN4Q9Y237 131 aaKnown RBP12.31□□□□□ -0.44
MSH5-214ENST00000468602 CEP290O15078 2479 aa12.31□□□□□ -0.44
MSH5-214ENST00000468602 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.3□□□□□ -0.44
MSH5-214ENST00000468602 EXTL3O43909 919 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 GNA14O95837 355 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 NR3C1P04150 777 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 ACTN1P12814 892 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 ATF7P17544 494 aaPredicted RBP12.3□□□□□ -0.44
MSH5-214ENST00000468602 FGFR4P22455 802 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 NFX1Q12986 1120 aaKnown RBP12.3□□□□□ -0.44
MSH5-214ENST00000468602 NCAPHQ15003 741 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 IQCB1Q15051 598 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 TCTN1Q2MV58 587 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 TMEM240Q5SV17 173 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 SPATA1Q5VX52 437 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 NT5DC4Q86YG4 428 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 GPD1LQ8N335 351 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 XXYLT1Q8NBI6 393 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 PHOSPHO2Q8TCD6 241 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 DPF3Q92784 378 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 BADQ92934 168 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 MFSD14AQ96MC6 490 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 PPP1R16BQ96T49 567 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 TSG101Q99816 390 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 ADAM2Q99965 735 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 CBWD1Q9BRT8 395 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 ASB7Q9H672 318 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 HSPBP1Q9NZL4 362 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 AGO2Q9UKV8 859 aaKnown RBP12.3□□□□□ -0.44
MSH5-214ENST00000468602 GIT1Q9Y2X7 761 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 TRIOBPQ9H2D6 2365 aa12.3□□□□□ -0.44
MSH5-214ENST00000468602 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 CITO14578 2027 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 LRRC10BA6NIK2 292 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 PMM2O15305 246 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
MSH5-214ENST00000468602 FGBP02675 491 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 NR2F2P24468 414 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 SURF1Q15526 300 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 ZNF568Q3ZCX4 644 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 ARMCX5Q6P1M9 558 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 C11orf57Q6ZUT1 292 aaPredicted RBP12.29□□□□□ -0.44
MSH5-214ENST00000468602 FRMD5Q7Z6J6 570 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 ECHDC2Q86YB7 292 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 BRSK2Q8IWQ3 736 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 NELFCDQ8IXH7 590 aa12.29□□□□□ -0.44
MSH5-214ENST00000468602 HACE1Q8IYU2 909 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms