RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SYT2Q8N9I0 419 aaPredicted RBP18.85■□□□□ 0.61
SSBP1-207ENST00000468267 SMRP1Q8NCR6 262 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 GSTCDQ8NEC7 633 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 CDK5RAP3Q96JB5 506 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 DRC1Q96MC2 740 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 PLIN2Q99541 437 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 TIPINQ9BVW5 301 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 DAXXQ9UER7 740 aaPredicted RBP18.85■□□□□ 0.61
SSBP1-207ENST00000468267 STK39Q9UEW8 545 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 PARP2Q9UGN5 583 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 USP20Q9Y2K6 914 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 IRAK3Q9Y616 596 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 TRIP11Q15643 1979 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 CCDC169A6NNP5 214 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 K7ERI5 159 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 SRGAP2BP0DMP2 458 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 GUCY2CP25092 1073 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 ZP2Q05996 745 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 MAPK7Q13164 816 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 NT5DC1Q5TFE4 455 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 ADHFE1Q8IWW8 467 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 AUTS2Q8WXX7 1259 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 ADPGKQ9BRR6 497 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 C17orf75Q9HAS0 396 aa18.84■□□□□ 0.61
SSBP1-207ENST00000468267 C19orf67A6NJJ6 358 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 CLASP2O75122 1294 aaKnown RBP18.83■□□□□ 0.6
SSBP1-207ENST00000468267 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSBP1-207ENST00000468267 PLA2G4BP0C869 781 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 SSTR3P32745 418 aaPredicted RBP18.83■□□□□ 0.6
SSBP1-207ENST00000468267 LONP1P36776 959 aaKnown RBP18.83■□□□□ 0.6
SSBP1-207ENST00000468267 UBA7P41226 1012 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 SLC12A3P55017 1021 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 RESTQ13127 1097 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 DMP1Q13316 513 aaPredicted RBP18.83■□□□□ 0.6
SSBP1-207ENST00000468267 GIT2Q14161 759 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 EEF1DP3Q658K8 133 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 LLGL2Q6P1M3 1020 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 TMEM134Q9H6X4 195 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 KLK14Q9P0G3 267 aa18.83■□□□□ 0.6
SSBP1-207ENST00000468267 RBM19Q9Y4C8 960 aaKnown RBP18.83■□□□□ 0.6
SSBP1-207ENST00000468267 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.82■□□□□ 0.6
SSBP1-207ENST00000468267 SFI1A8K8P3 1242 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 CA8P35219 290 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 OR1G1P47890 313 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 GRIN1Q05586 938 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 ATF7IP2Q5U623 682 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 ANKRD54Q6NXT1 300 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 KHSRPQ92945 711 aaKnown RBP eCLIP18.82■□□□□ 0.6
SSBP1-207ENST00000468267 SNX21Q969T3 373 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 CALML4Q96GE6 196 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 NTPCRQ9BSD7 190 aaKnown RBP18.82■□□□□ 0.6
SSBP1-207ENST00000468267 KMT5AQ9NQR1 393 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 MARCH5Q9NX47 278 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 SNTG2Q9NY99 539 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 KCND2Q9NZV8 630 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 ARHGAP28Q9P2N2 729 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 PRG3Q9Y2Y8 225 aaPredicted RBP18.82■□□□□ 0.6
SSBP1-207ENST00000468267 USP15Q9Y4E8 981 aaPredicted RBP18.82■□□□□ 0.6
SSBP1-207ENST00000468267 CLIC4Q9Y696 253 aa18.82■□□□□ 0.6
SSBP1-207ENST00000468267 PHLPP2Q6ZVD8 1323 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 NR1I2O75469 434 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 EFEMP2O95967 443 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 HOXB8P17481 243 aaPredicted RBP18.81■□□□□ 0.6
SSBP1-207ENST00000468267 RAD51AP2Q09MP3 1159 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 GRIK3Q13003 919 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 PTPAQ15257 358 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 PTPN14Q15678 1187 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 DCAF4L1Q3SXM0 396 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 SYCE2Q6PIF2 218 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 TAS1R3Q7RTX0 852 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 TMEM87AQ8NBN3 555 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 CASP10Q92851 521 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 RPS6KC1Q96S38 1066 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 S1PR5Q9H228 398 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 EPHX3Q9H6B9 360 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 KCNG1Q9UIX4 513 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 MTMR6Q9Y217 621 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 HCFC2Q9Y5Z7 792 aa18.81■□□□□ 0.6
SSBP1-207ENST00000468267 SLC16A4O15374 487 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 LILRB3O75022 631 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 RECQL4O94761 1208 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 PLS3P13797 630 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 ARSHQ5FYA8 562 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 APBB1IPQ7Z5R6 666 aaPredicted RBP18.8■□□□□ 0.6
SSBP1-207ENST00000468267 SPIRE2Q8WWL2 714 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 SUSD6Q92537 303 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 POP1Q99575 1024 aaKnown RBP18.8■□□□□ 0.6
SSBP1-207ENST00000468267 ACO2Q99798 780 aaKnown RBP18.8■□□□□ 0.6
SSBP1-207ENST00000468267 COLEC11Q9BWP8 271 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 TNFSF13BQ9Y275 285 aa18.8■□□□□ 0.6
SSBP1-207ENST00000468267 NPHP3-ACAD11A0A0J9YXS1 232 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 F8W810 466 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 PI4K2BG5E9Z4 385 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 PTGESO14684 152 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 SOD2P04179 222 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 FAM173BQ6P4H8 233 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 TAS1R1Q7RTX1 841 aa18.79■□□□□ 0.6
SSBP1-207ENST00000468267 RNF168Q8IYW5 571 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms