RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	PPP2R3C	Q969Q6	453 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	PLIN2	Q99541	437 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	KIAA1671	Q9BY89	1806 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	GRPEL1	Q9HAV7	217 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	AGPAT5	Q9NUQ2	364 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	EXOC1	Q9NV70	894 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	SEL1L	Q9UBV2	794 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	TCF20	Q9UGU0	1960 aa	Known RBP	13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	ODF2L	Q9ULJ1	636 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	PIN4	Q9Y237	131 aa	Known RBP	13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	LZTS1	Q9Y250	596 aa		13.26	□□□□□ -0.29
CTNS-205	ENST00000467663	NCOR1	O75376	2440 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	ARID2	Q68CP9	1835 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	ARHGEF35	A5YM69	484 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	MYMK	A6NI61	221 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663		E9PMD0	336 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	IKBKB	O14920	756 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	KLRC4	O43908	158 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	DGAT1	O75907	488 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	PRR29	P0C7W0	189 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	SRGAP2C	P0DJJ0	459 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	IL9	P15248	144 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	GAP43	P17677	238 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	CYP11B2	P19099	503 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	GUCY2C	P25092	1073 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	RARRES1	P49788	294 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	RAB27A	P51159	221 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	POU5F1B	Q06416	359 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	MXD4	Q14582	209 aa	Predicted RBP	13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	TWF2	Q6IBS0	349 aa	Known RBP	13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	PDE12	Q6L8Q7	609 aa	Known RBP	13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	FOXR2	Q6PJQ5	311 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	KCNT2	Q6UVM3	1135 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	KCNK18	Q7Z418	384 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	ADGRD2	Q7Z7M1	963 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	GPBP1	Q86WP2	473 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	FAM178B	Q8IXR5	827 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	THNSL1	Q8IYQ7	743 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	HELQ	Q8TDG4	1101 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	ANP32B	Q92688	251 aa	Known RBP	13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	CCDC43	Q96MW1	224 aa	Known RBP	13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	MRPL9	Q9BYD2	267 aa	Known RBP	13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	BHMT2	Q9H2M3	363 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	MINDY3	Q9H8M7	445 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	TLR9	Q9NR96	1032 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	FAM105A	Q9NUU6	356 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	MYO7A	Q13402	2215 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	ATG2A	Q2TAZ0	1938 aa		13.25	□□□□□ -0.29
CTNS-205	ENST00000467663	BDP1	A6H8Y1	2624 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	FRMD3	A2A2Y4	597 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	BECN2	A8MW95	431 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	GOLGA6L19	H0YKK7	550 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	FSCN2	O14926	492 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	LINC01565	O15544	149 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	CSPG5	O95196	566 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	SSB	P05455	408 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	KRT18	P05783	430 aa	Known RBP	13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	SCP2	P22307	547 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	HOXA11	P31270	313 aa	Predicted RBP	13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	ABCD1	P33897	745 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	PPM1A	P35813	382 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	ARL2	P36404	184 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	PTEN	P60484	403 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	ERVFC1	P60507	584 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	DLX2	Q07687	328 aa	Predicted RBP	13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	KMT5B	Q4FZB7	885 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	RINT1	Q6NUQ1	792 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	EP400NL	Q6ZTU2	488 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	GRAMD1C	Q8IYS0	662 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	EFHB	Q8N7U6	833 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	RNF149	Q8NC42	400 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	PIGO	Q8TEQ8	1089 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	LRRC15	Q8TF66	581 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	DNAJC19	Q96DA6	116 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	ZNF558	Q96NG5	402 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	DNAJC25	Q9H1X3	360 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	BLZF1	Q9H2G9	400 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	IGFLR1	Q9H665	355 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	C17orf75	Q9HAS0	396 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	PCDHGC5	Q9Y5F6	944 aa		13.24	□□□□□ -0.29
CTNS-205	ENST00000467663	TBX10	O75333	385 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	MAPT	P10636	758 aa	Known RBP	13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	NRIP1	P48552	1158 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	EHHADH	Q08426	723 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	TFDP1	Q14186	410 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	DPCR1	Q3MIW9	517 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	UBXN11	Q5T124	520 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	STXBP4	Q6ZWJ1	553 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	C1orf186	Q6ZWK4	172 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	MRPL10	Q7Z7H8	261 aa	Known RBP	13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	SLC39A11	Q8N1S5	342 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	ENOX1	Q8TC92	643 aa	Known RBP	13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	MICAL1	Q8TDZ2	1067 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	STAM	Q92783	540 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	LPP	Q93052	612 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	PGBD4	Q96DM1	585 aa		13.23	□□□□□ -0.29
CTNS-205	ENST00000467663	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms