RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 HNRNPLP14866 589 aaKnown RBP eCLIP5.32□□□□□ -1.562e-15■■■■■ 47.4
SMC4-208ENST00000467468 ACO1P21399 889 aaKnown RBP5.32□□□□□ -1.56
SMC4-208ENST00000467468 AKAP5P24588 427 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 MANFP55145 182 aaKnown RBP5.32□□□□□ -1.56
SMC4-208ENST00000467468 PUM1Q14671 1186 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMC4-208ENST00000467468 LONRF3Q496Y0 759 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 RRP12Q5JTH9 1297 aaKnown RBP5.32□□□□□ -1.56
SMC4-208ENST00000467468 ZBTB41Q5SVQ8 909 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 GLB1L2Q8IW92 636 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 GPR135Q8IZ08 494 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 ANKRD35Q8N283 1001 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 GAB3Q8WWW8 586 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 TIFAQ96CG3 184 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 RPL10LQ96L21 214 aaKnown RBP5.32□□□□□ -1.56
SMC4-208ENST00000467468 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 IL23AQ9NPF7 189 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 NMRK2Q9NPI5 230 aa5.32□□□□□ -1.56
SMC4-208ENST00000467468 PRSS38A1L453 326 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 LDHAP00338 332 aaKnown RBP5.31□□□□□ -1.56
SMC4-208ENST00000467468 HSPA6P17066 643 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 KIR2DL3P43628 341 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 KRTAP10-2P60368 255 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 PPARAQ07869 468 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 FOXL1Q12952 345 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 GRM3Q14832 879 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 R3HDM1Q15032 1099 aaKnown RBP5.31□□□□□ -1.56
SMC4-208ENST00000467468 CLUL1Q15846 466 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 CCDC62Q6P9F0 684 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 SGMS1Q86VZ5 419 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 PJA1Q8NG27 643 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 OR14C36Q8NHC7 312 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 SH3RF3Q8TEJ3 882 aaPredicted RBP5.31□□□□□ -1.56
SMC4-208ENST00000467468 JADE3Q92613 823 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 ARL8AQ96BM9 186 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 TMEM176AQ96HP8 235 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 PAWRQ96IZ0 340 aaKnown RBP5.31□□□□□ -1.56
SMC4-208ENST00000467468 TCF25Q9BQ70 676 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 ZNF277Q9NRM2 450 aaPredicted RBP5.31□□□□□ -1.56
SMC4-208ENST00000467468 PPP2R3BQ9Y5P8 575 aa5.31□□□□□ -1.56
SMC4-208ENST00000467468 ANO9A1A5B4 782 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 LCHNA4D1U4 455 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 PHKG2P15735 406 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 AGXTP21549 392 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 ENPP1P22413 925 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 MTNR1BP49286 362 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 NPEPPSP55786 919 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 SPIDRQ14159 915 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 ACAP2Q15057 778 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 CDSNQ15517 529 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 FSCN1Q16658 493 aaKnown RBP5.3□□□□□ -1.56
SMC4-208ENST00000467468 ARHGAP29Q52LW3 1261 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 CYB5RLQ6IPT4 315 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 MFSD5Q6N075 450 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 B3GNT9Q6UX72 402 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 MAMDC4Q6UXC1 1216 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 TSHZ1Q6ZSZ6 1077 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 TTC17Q96AE7 1141 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 LRGUKQ96M69 825 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 GPHA2Q96T91 129 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 ANO3Q9BYT9 981 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 SLC12A5Q9H2X9 1139 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 C1orf112Q9NSG2 853 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 AURKAIP1Q9NWT8 199 aaPredicted RBP5.3□□□□□ -1.56
SMC4-208ENST00000467468 DNAJC28Q9NX36 388 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 NCDNQ9UBB6 729 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 GPR45Q9Y5Y3 372 aa5.3□□□□□ -1.56
SMC4-208ENST00000467468 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 UBE2QL1A1L167 161 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 ALDH1A2O94788 518 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 SEC24DO94855 1032 aaPredicted RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 GAAP10253 952 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 HIBADHP31937 336 aaKnown RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 ADKP55263 362 aaKnown RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 MEF2AQ02078 507 aaPredicted RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 PICALMQ13492 652 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 SAFB2Q14151 953 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMC4-208ENST00000467468 GALEQ14376 348 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 UGT8Q16880 541 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 SPDYAQ5MJ70 313 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 IFIT1BQ5T764 474 aaKnown RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 FAM111BQ6SJ93 734 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 GAREM2Q75VX8 874 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 CMTM4Q8IZR5 234 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 THEMISQ8N1K5 641 aaPredicted RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 ZNF808Q8N4W9 903 aaPredicted RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 PPP1R14CQ8TAE6 165 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 SLC35G2Q8TBE7 412 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 TGFBRAP1Q8WUH2 860 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 SOX7Q9BT81 388 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 CSRNP2Q9H175 543 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 AGO3Q9H9G7 860 aaKnown RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.561e-26■■■■■ 198.7
SMC4-208ENST00000467468 TLR9Q9NR96 1032 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMC4-208ENST00000467468 DDX20Q9UHI6 824 aaKnown RBP5.29□□□□□ -1.56
SMC4-208ENST00000467468 USP25Q9UHP3 1055 aa5.29□□□□□ -1.56
SMC4-208ENST00000467468 PRSS50Q9UI38 385 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms