RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MUM1L1Q5H9M0 696 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 DOK3Q7L591 496 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 MDM1Q8TC05 714 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 RIN2Q8WYP3 895 aaPredicted RBP5.08□□□□□ -1.6
VPS50-209ENST00000467326 FATE1Q969F0 183 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 PDCD2LQ9BRP1 358 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 CPEB1Q9BZB8 566 aaKnown RBP5.08□□□□□ -1.6
VPS50-209ENST00000467326 GREM2Q9H772 168 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 DMRT3Q9NQL9 472 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 CEP72Q9P209 647 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 TRPS1Q9UHF7 1281 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 HDAC5Q9UQL6 1122 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 GPR45Q9Y5Y3 372 aa5.08□□□□□ -1.6
VPS50-209ENST00000467326 ARID4BQ4LE39 1312 aaPredicted RBP5.07□□□□□ -1.6
VPS50-209ENST00000467326 B5MCH6 92 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 ADCY6O43306 1168 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 AKR1B10O60218 316 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 ZNF202O95125 648 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 ACVRL1P37023 503 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 IARSP41252 1262 aaKnown RBP5.07□□□□□ -1.6
VPS50-209ENST00000467326 AMPD3Q01432 767 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 APBA1Q02410 837 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 PRAMEF14Q5SWL7 426 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 NAIF1Q69YI7 327 aaPredicted RBP5.07□□□□□ -1.6
VPS50-209ENST00000467326 PDZD4Q76G19 769 aaPredicted RBP5.07□□□□□ -1.6
VPS50-209ENST00000467326 FAM83AQ86UY5 434 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 Q8N1X5 172 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 GPR156Q8NFN8 814 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 OR52N2Q8NGI0 321 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 MTMR8Q96EF0 704 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 MNTQ99583 582 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 LSM14BQ9BX40 385 aaKnown RBP5.07□□□□□ -1.6
VPS50-209ENST00000467326 TRIM8Q9BZR9 551 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 SCAND2PQ9GZW5 306 aaPredicted RBP5.07□□□□□ -1.6
VPS50-209ENST00000467326 ZNF703Q9H7S9 590 aaPredicted RBP5.07□□□□□ -1.6
VPS50-209ENST00000467326 SCOCQ9UIL1 159 aa5.07□□□□□ -1.6
VPS50-209ENST00000467326 TRIM75PA6NK02 468 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 NPIPB8E9PQR5 432 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 PLSCR1O15162 318 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 MT-CO1P00395 513 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 AGXTP21549 392 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 ADSLP30566 484 aaPredicted RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 GUCY2FP51841 1108 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 TUBA3CQ13748 450 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 TOB2Q14106 344 aaPredicted RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 CLUL1Q15846 466 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 ABCB5Q2M3G0 1257 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 LSM12Q3MHD2 195 aaKnown RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 METTL24Q5JXM2 366 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 TUBA3EQ6PEY2 450 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 FAM180AQ6UWF9 173 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 XYLT1Q86Y38 959 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 TRMT2AQ8IZ69 625 aaKnown RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 PRPF38AQ8NAV1 312 aaKnown RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 UHRF1Q96T88 793 aaPredicted RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 ADI1Q9BV57 179 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 BCO1Q9HAY6 547 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 ZNF277Q9NRM2 450 aaPredicted RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 RBM12Q9NTZ6 932 aaKnown RBP5.06□□□□□ -1.6
VPS50-209ENST00000467326 COL4A3BPQ9Y5P4 624 aa5.06□□□□□ -1.6
VPS50-209ENST00000467326 ZMYM3Q14202 1370 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 PRR5-ARHGAP8B1AHC4 643 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 PTPN7P35236 360 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 FLT3LGP49771 235 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 PPP3CAQ08209 521 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 MTMR1Q13613 665 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 FAM50AQ14320 339 aaKnown RBP5.05□□□□□ -1.6
VPS50-209ENST00000467326 VPS72Q15906 364 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 RABL3Q5HYI8 236 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 CRB2Q5IJ48 1285 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 SYDE2Q5VT97 1194 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 ZFPM1Q8IX07 1006 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 ANKRD13AQ8IZ07 590 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 CBARPQ8N350 705 aaPredicted RBP5.05□□□□□ -1.6
VPS50-209ENST00000467326 OR7D4Q8NG98 312 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 SSH1Q8WYL5 1049 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 HOXB13Q92826 284 aaPredicted RBP5.05□□□□□ -1.6
VPS50-209ENST00000467326 CEP95Q96GE4 821 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 PCDH12Q9NPG4 1184 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 TRHDEQ9UKU6 1024 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 CLCA2Q9UQC9 943 aa5.05□□□□□ -1.6
VPS50-209ENST00000467326 GRXCR1A8MXD5 290 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 ALG1L2C9J202 215 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 TRIM24O15164 1050 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 FAM20BO75063 409 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 KATNA1O75449 491 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 ENDOD1O94919 500 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 SLPIP03973 132 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 MCAMP43121 646 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 ITKQ08881 620 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 ABHD18Q0P651 414 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 MGAT2Q10469 447 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 NOMO1Q15155 1222 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 INAVAQ3KP66 663 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 MFSD14BQ5SR56 506 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 Q6ZVL8 140 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 ZNF572Q7Z3I7 529 aaPredicted RBP5.04□□□□□ -1.6
VPS50-209ENST00000467326 REPS2Q8NFH8 660 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 FBXO18Q8NFZ0 1043 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 OR10H5Q8NGA6 315 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms