RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
CHD1L-205ENST00000467213 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 RUSC1Q9BVN2 902 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 PPCSQ9HAB8 311 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 JAG2Q9Y219 1238 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 USH1CQ9Y6N9 552 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 SMIM23A6NLE4 172 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 CLIC2O15247 247 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 NPTXRO95502 500 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 BRAFP15056 766 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 TAC1P20366 129 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 SLCO1A2P46721 670 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 IL9RQ01113 521 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 CETN1Q12798 172 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 PHLDB3Q6NSJ2 640 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ZNF720Q7Z2F6 126 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ADAT2Q7Z6V5 191 aaKnown RBP16.66■□□□□ 0.26
CHD1L-205ENST00000467213 TDRPQ86YL5 185 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
CHD1L-205ENST00000467213 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 CCDC77Q9BR77 488 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 TRAIPQ9BWF2 469 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 PARVGQ9HBI0 331 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 AGPAT3Q9NRZ7 376 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 CYP39A1Q9NYL5 469 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 GTF3C4Q9UKN8 822 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 MROH7Q68CQ1 1323 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 FOXN3O00409 490 aaPredicted RBP16.66■□□□□ 0.26
CHD1L-205ENST00000467213 DCTN3O75935 186 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ACADSP16219 412 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ATP6V1C1P21283 382 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 IBSPP21815 317 aaPredicted RBP16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 STX2P32856 288 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 MGAT5Q09328 741 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 SETDB1Q15047 1291 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 LONRF1Q17RB8 773 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ECHDC2Q86YB7 292 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ZNF398Q8TD17 642 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 STK32AQ8WU08 396 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 HSD17B14Q9BPX1 270 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 ANKRD63C9JTQ0 380 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 PRPF4O43172 522 aaKnown RBP eCLIP16.65■□□□□ 0.265e-9■■■□□ 16.8
CHD1L-205ENST00000467213 FAM13AO94988 1023 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 MAPTP10636 758 aaKnown RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 SNRPFP62306 86 aaKnown RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 PPARDQ03181 441 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 ALCAMQ13740 583 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 TAF11Q15544 211 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 UBAP2Q5T6F2 1119 aaKnown RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 RNF207Q6ZRF8 634 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 PALB2Q86YC2 1186 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 SPICE1Q8N0Z3 855 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 PIGOQ8TEQ8 1089 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 FBXO41Q8TF61 875 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 PRCCQ92733 491 aaPredicted RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 RMDN2Q96LZ7 410 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 BHMT2Q9H2M3 363 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 RSPH10B2B2RC85 870 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 RSPH10BP0C881 870 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 PTP4A2Q12974 167 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 DPP8Q6V1X1 898 aaPredicted RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 EP400NLQ6ZTU2 488 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 INTS8Q75QN2 995 aaKnown RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 LMNTD2Q8IXW0 634 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 MARCH10Q8NA82 808 aaPredicted RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 UTP4Q969X6 686 aaKnown RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 EIF2AK1Q9BQI3 630 aaKnown RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 SENP1Q9P0U3 644 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
CHD1L-205ENST00000467213 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
CHD1L-205ENST00000467213 TAF1LQ8IZX4 1826 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 KLHL33A6NCF5 533 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 RPS6KA4O75676 772 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 ABL2P42684 1182 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 CENPCQ03188 943 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 EPC2Q52LR7 807 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 LNPEPQ9UIQ6 1025 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 PCDHA1Q9Y5I3 950 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L15C9J2P7 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L13C9JLJ4 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L11C9JVI0 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L18D6R9N7 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L22D6RA61 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L17D6RBQ6 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L19D6RCP7 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 USP17L20D6RJB6 530 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 PEX11AO75192 247 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 LINGO3P0C6S8 592 aa16.64■□□□□ 0.25
CHD1L-205ENST00000467213 MARCKSL1P49006 195 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms